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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123164645   spermine synthase 
 tae-r.2   100682470   spermine synthase 
 tae-r.2   123147926   spermine synthase 
 tae-r.2   123111597   spermine synthase 
 hvu-r.1   123394905   spermine synthase-like 
 hvu-r.1   123410028   spermine synthase-like 
 bdi-r.1   100831817   spermine synthase 
 bdi-r.1   100836971   spermine synthase 
 osa-u.5   4328910   spermine synthase 
 osa-u.5   4341195   spermine synthase 
 zma-u.5   732743   spermine synthase1 
 zma-u.5   100279222   spermidine synthase 1 
 zma-u.5   100282933   spermidine synthase 1 
 sbi-r.1   8058858   spermine synthase 
 sbi-r.1   8085223   spermine synthase 
 sbi-r.1   8078343   spermine synthase 
 ath-u.5   SPDS3   spermidine synthase 3 
 gma-u.5   100816988   spermine synthase 
 gma-u.5   100815244   spermine synthase 
 sly-u.5   SPM1   SPM1 protein 
 bra-r.6   103852054   spermine synthase 
 bra-r.6   103844792   spermine synthase 
 vvi-u.5   100232840   spermine synthase 
 ppo-u.5   7465536   spermine synthase 
 ppo-u.5   7489825   spermine synthase 
 mtr-u.5   11417417   spermine synthase 
 mtr-u.5   25482358   spermine synthase 
 ghi-r.1   107947253   spermine synthase 
 ghi-r.1   107929559   spermine synthase-like 
 ghi-r.1   107908990   spermine synthase 
 bna-r.1   106414322   spermine synthase-like 
 bna-r.1   106391720   spermine synthase 
 bna-r.1   106367536   spermine synthase-like 
 sot-r.1   102582757   spermine synthase 
 cit-r.1   102621922   spermine synthase 
 nta-r.1   107770315   spermine synthase 
 nta-r.1   107764611   spermine synthase 

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Top 50 coexpressed genes to 123164645 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123164645 (tae-r.2 coexpression data)

CoexMap"123164645"


taeLOC123164645 | Entrez gene ID : 123164645    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 2 2 2 3 3 1 2 1 2 1 2 2 3 3 1 1 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes00270 [list] [network] Cysteine and methionine metabolism (411 genes)
taes00330 [list] [network] Arginine and proline metabolism (179 genes)
taes00480 [list] [network] Glutathione metabolism (473 genes)
GO BP
GO:0008295 [list] [network] spermidine biosynthetic process  (34 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (2324 genes)  IEA  
GO MF
GO:0004766 [list] [network] spermidine synthase activity  (12 genes)  IEA  
Protein XP_044438125.1 [sequence] [blastp]
XP_044438126.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 1,  extr 1,  pero 1,  cysk 1  (predict for XP_044438125.1)
cyto 4,  chlo 1,  extr 1,  pero 1,  cysk 1  (predict for XP_044438126.1)
Subcellular
localization
TargetP
other 5,  chlo 4  (predict for XP_044438125.1)
other 5,  chlo 4  (predict for XP_044438126.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123164645
tae-r.2
for
100682470
tae-r.2
for
123147926
tae-r.2
for
123111597
hvu-r.1
for
123394905
hvu-r.1
for
123410028
bdi-r.1
for
100831817
bdi-r.1
for
100836971
osa-u.5
for
4328910
osa-u.5
for
4341195
zma-u.5
for
732743
zma-u.5
for
100279222
zma-u.5
for
100282933
sbi-r.1
for
8058858
sbi-r.1
for
8085223
sbi-r.1
for
8078343
ath-u.5
for
SPDS3
gma-u.5
for
100816988
gma-u.5
for
100815244
sly-u.5
for
SPM1
bra-r.6
for
103852054
bra-r.6
for
103844792
vvi-u.5
for
100232840
ppo-u.5
for
7465536
ppo-u.5
for
7489825
mtr-u.5
for
11417417
mtr-u.5
for
25482358
ghi-r.1
for
107947253
ghi-r.1
for
107929559
ghi-r.1
for
107908990
bna-r.1
for
106414322
bna-r.1
for
106391720
bna-r.1
for
106367536
sot-r.1
for
102582757
cit-r.1
for
102621922
nta-r.1
for
107770315
nta-r.1
for
107764611


Ortholog ID: 4993
Species tae tae tae hvu hvu bdi bdi osa osa zma zma zma sbi sbi sbi ath gma gma sly bra bra vvi ppo ppo mtr mtr ghi ghi ghi bna bna bna sot cit nta nta
Symbol LOC123147926 LOC123103399 LOC123120961 LOC123394905 LOC123410028 LOC100831817 LOC100836971 LOC4328910 LOC4341195 LOC732743 LOC100279222 LOC100282933 LOC8058858 LOC8085223 LOC8078343 SPDS3 LOC100816988 LOC100815244 SPM1 LOC103852054 LOC103844792 LOC100232840 LOC7465536 LOC7489825 LOC11417417 LOC25482358 LOC107929559 LOC107908990 LOC107910988 LOC106414322 LOC106391720 LOC106367536 LOC102582757 LOC102621922 LOC107770315 LOC107764611
Function* spermine synthase spermine synthase spermine synthase spermine synthase-like spermine synthase-like spermine synthase spermine synthase spermine synthase spermine synthase spermine synthase1 spermidine synthase 1 spermidine synthase 1 spermine synthase spermine synthase spermine synthase spermidine synthase 3 spermine synthase spermine synthase SPM1 protein spermine synthase spermine synthase spermine synthase spermine synthase spermine synthase spermine synthase spermine synthase spermine synthase-like spermine synthase spermine synthase spermine synthase-like spermine synthase spermine synthase-like spermine synthase spermine synthase spermine synthase spermine synthase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00052 Galactose metabolism 3
tae00500 Starch and sucrose metabolism 3
tae00270 Cysteine and methionine metabolism 3
tae00330 Arginine and proline metabolism 3
tae00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00620 Pyruvate metabolism 3
tae00270 Cysteine and methionine metabolism 3
tae00330 Arginine and proline metabolism 3
tae00480 Glutathione metabolism 3
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00270 Cysteine and methionine metabolism 3
tae00330 Arginine and proline metabolism 3
tae00480 Glutathione metabolism 3
tae03082 ATP-dependent chromatin remodeling 3
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00250 Alanine, aspartate and glutamate metabolism 2
hvu00260 Glycine, serine and threonine metabolism 2
hvu00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 6
bdi01200 Carbon metabolism 6
bdi00710 Carbon fixation by Calvin cycle 3
bdi00270 Cysteine and methionine metabolism 2
bdi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00270 Cysteine and methionine metabolism 3
osa00480 Glutathione metabolism 3
osa01230 Biosynthesis of amino acids 2
osa01240 Biosynthesis of cofactors 2
osa00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00564 Glycerophospholipid metabolism 3
zma04070 Phosphatidylinositol signaling system 2
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 4
zma03050 Proteasome 3
zma03082 ATP-dependent chromatin remodeling 2
zma03083 Polycomb repressive complex 2
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00564 Glycerophospholipid metabolism 2
sbi04070 Phosphatidylinositol signaling system 2
sbi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
sbi00270 Cysteine and methionine metabolism 2
sbi00330 Arginine and proline metabolism 2
sbi00480 Glutathione metabolism 2
sbi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00270 Cysteine and methionine metabolism 3
sbi01240 Biosynthesis of cofactors 3
sbi00330 Arginine and proline metabolism 2
sbi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 7
ath00330 Arginine and proline metabolism 3
ath01200 Carbon metabolism 2
ath04141 Protein processing in endoplasmic reticulum 2
ath00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00270 Cysteine and methionine metabolism 2
gma00330 Arginine and proline metabolism 2
gma00480 Glutathione metabolism 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00270 Cysteine and methionine metabolism 2
gma00330 Arginine and proline metabolism 2
gma00480 Glutathione metabolism 2
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00330 Arginine and proline metabolism 4
sly00270 Cysteine and methionine metabolism 3
sly00940 Phenylpropanoid biosynthesis 3
sly00941 Flavonoid biosynthesis 2
sly00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00270 Cysteine and methionine metabolism 2
vvi00330 Arginine and proline metabolism 2
vvi00360 Phenylalanine metabolism 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ppo00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04016 MAPK signaling pathway - plant 4
ppo04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00270 Cysteine and methionine metabolism 2
mtr00330 Arginine and proline metabolism 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 4
ghi00330 Arginine and proline metabolism 4
ghi00480 Glutathione metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 4
ghi00330 Arginine and proline metabolism 4
ghi00480 Glutathione metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 4
ghi00330 Arginine and proline metabolism 4
ghi00480 Glutathione metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 4
bna00270 Cysteine and methionine metabolism 3
bna00330 Arginine and proline metabolism 3
bna00480 Glutathione metabolism 3
bna00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 3
bna00330 Arginine and proline metabolism 3
bna00480 Glutathione metabolism 3
bna00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 3
bna00330 Arginine and proline metabolism 3
bna00480 Glutathione metabolism 3
bna00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00270 Cysteine and methionine metabolism 4
sot00330 Arginine and proline metabolism 3
sot00480 Glutathione metabolism 3
sot04122 Sulfur relay system 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 2
nta00330 Arginine and proline metabolism 2
nta00480 Glutathione metabolism 2
nta00940 Phenylpropanoid biosynthesis 2
nta00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 2
nta00330 Arginine and proline metabolism 2
nta00480 Glutathione metabolism 2
nta00940 Phenylpropanoid biosynthesis 2
nta00941 Flavonoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123147926 123103399 123120961 123394905 123410028 100831817 100836971 4328910 4341195 732743 100279222 100282933 8058858 8085223 8078343 835392 100816988 100815244 543894 103852054 103844792 100232840 7465536 7489825 11417417 25482358 107929559 107908990 107910988 106414322 106391720 106367536 102582757 102621922 107770315 107764611
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