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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123179775   vacuolar protein sorting-associated protein 60.1 
 tae-r.2   123102700   vacuolar protein sorting-associated protein 60.1 
 tae-r.2   123068692   vacuolar protein sorting-associated protein 60.1 
 hvu-r.1   123442732   vacuolar protein sorting-associated protein 60.1-like 
 hvu-r.1   123441976   vacuolar protein sorting-associated protein 60.1-like 
 bdi-r.1   100825412   vacuolar protein sorting-associated protein 60.1 
 bdi-r.1   100841033   vacuolar protein sorting-associated protein 60.2 
 osa-u.5   9266052   vacuolar protein sorting-associated protein 60.1 
 osa-u.5   4337536   vacuolar protein sorting-associated protein 60.2 
 zma-u.5   100284928   uncharacterized LOC100284928 
 zma-u.5   100273036   uncharacterized LOC100273036 
 sbi-r.1   8066585   charged multivesicular body protein 5 
 sbi-r.1   8072371   charged multivesicular body protein 5 
 ath-u.5   VPS60.1   SNF7 family protein 
 ath-u.5   VPS60.2   SNF7 family protein 
 gma-u.5   100527083   SNF7 family protein 
 sly-u.5   101248200   vacuolar protein sorting-associated protein 60.2 
 sly-u.5   101259697   vacuolar protein sorting-associated protein 60.1 
 bra-r.6   103859354   vacuolar protein sorting-associated protein 60.1 
 bra-r.6   103847254   vacuolar protein sorting-associated protein 60.2 
 bra-r.6   103855589   vacuolar protein sorting-associated protein 60.2 
 vvi-u.5   100244534   vacuolar protein sorting-associated protein 60.2 
 vvi-u.5   100240918   vacuolar protein sorting-associated protein 60.2 
 ppo-u.5   7469518   vacuolar protein sorting-associated protein 60.1 
 ppo-u.5   7490888   vacuolar protein sorting-associated protein 60.1 
 mtr-u.5   11418361   vacuolar protein sorting-associated protein 60.1 
 ghi-r.1   107896276   vacuolar protein sorting-associated protein 60.1 
 ghi-r.1   107904373   vacuolar protein sorting-associated protein 60.2 
 ghi-r.1   107904768   vacuolar protein sorting-associated protein 60.2 
 bna-r.1   106440630   vacuolar protein sorting-associated protein 60.2-like 
 bna-r.1   106428238   vacuolar protein sorting-associated protein 60.2 
 bna-r.1   106419408   vacuolar protein sorting-associated protein 60.2 
 sot-r.1   102585470   charged multivesicular body protein 5-like 
 sot-r.1   102578965   charged multivesicular body protein 5-like 
 cit-r.1   102631392   vacuolar protein sorting-associated protein 60.2 
 nta-r.1   107813782   vacuolar protein sorting-associated protein 60.1-like 
 nta-r.1   107793425   vacuolar protein sorting-associated protein 60.2 
 nta-r.1   107803543   vacuolar protein sorting-associated protein 60.2 
 cre-r.1   CHLRE_13g577950v5   uncharacterized protein 

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Top 50 coexpressed genes to 123179775 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123179775 (tae-r.2 coexpression data)

CoexMap"123179775"


taeLOC123179775 | Entrez gene ID : 123179775    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 2 2 2 2 2 2 1 2 3 2 2 1 3 3 2 1 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes04144 [list] [network] Endocytosis (447 genes)
GO BP
GO:0032511 [list] [network] late endosome to vacuole transport via multivesicular body sorting pathway  (92 genes)  IEA  
GO:0006900 [list] [network] vesicle budding from membrane  (125 genes)  IEA  
GO CC
GO:0005771 [list] [network] multivesicular body  (28 genes)  IEA  
GO MF
Protein XP_044447583.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  mito 4,  cyto 1  (predict for XP_044447583.1)
Subcellular
localization
TargetP
other 8  (predict for XP_044447583.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123179775
tae-r.2
for
123102700
tae-r.2
for
123068692
hvu-r.1
for
123442732
hvu-r.1
for
123441976
bdi-r.1
for
100825412
bdi-r.1
for
100841033
osa-u.5
for
9266052
osa-u.5
for
4337536
zma-u.5
for
100284928
zma-u.5
for
100273036
sbi-r.1
for
8066585
sbi-r.1
for
8072371
ath-u.5
for
VPS60.1
ath-u.5
for
VPS60.2
gma-u.5
for
100527083
sly-u.5
for
101248200
sly-u.5
for
101259697
bra-r.6
for
103859354
bra-r.6
for
103847254
bra-r.6
for
103855589
vvi-u.5
for
100244534
vvi-u.5
for
100240918
ppo-u.5
for
7469518
ppo-u.5
for
7490888
mtr-u.5
for
11418361
ghi-r.1
for
107896276
ghi-r.1
for
107904373
ghi-r.1
for
107904768
bna-r.1
for
106440630
bna-r.1
for
106428238
bna-r.1
for
106419408
sot-r.1
for
102585470
sot-r.1
for
102578965
cit-r.1
for
102631392
nta-r.1
for
107813782
nta-r.1
for
107793425
nta-r.1
for
107803543
cre-r.1
for
CHLRE_13g577950v5


Ortholog ID: 3098
Species tae tae hvu hvu bdi bdi osa osa zma zma sbi sbi ath ath gma sly sly bra bra bra vvi vvi ppo ppo mtr ghi ghi ghi bna bna bna sot sot cit nta nta nta cre
Symbol LOC123068692 LOC123184390 LOC123442732 LOC123441976 LOC100825412 LOC100841033 LOC9266052 LOC4337536 LOC100284928 LOC100273036 LOC8066585 LOC8072371 VPS60.1 VPS60.2 LOC100527083 LOC101248200 LOC101259697 LOC103859354 LOC103847254 LOC103855589 LOC100244534 LOC100240918 LOC7469518 LOC7490888 LOC11418361 LOC107904373 LOC107904768 LOC107915713 LOC106428238 LOC106389081 LOC106358541 LOC102585470 LOC102578965 LOC102631392 LOC107813782 LOC107793425 LOC107803543 CHLRE_13g577950v5
Function* vacuolar protein sorting-associated protein 60.1 vacuolar protein sorting-associated protein 60.1 vacuolar protein sorting-associated protein 60.1-like vacuolar protein sorting-associated protein 60.1-like vacuolar protein sorting-associated protein 60.1 vacuolar protein sorting-associated protein 60.2 vacuolar protein sorting-associated protein 60.1 vacuolar protein sorting-associated protein 60.2 uncharacterized LOC100284928 uncharacterized LOC100273036 charged multivesicular body protein 5 charged multivesicular body protein 5 SNF7 family protein SNF7 family protein SNF7 family protein vacuolar protein sorting-associated protein 60.2 vacuolar protein sorting-associated protein 60.1 vacuolar protein sorting-associated protein 60.1 vacuolar protein sorting-associated protein 60.2 vacuolar protein sorting-associated protein 60.2 vacuolar protein sorting-associated protein 60.2 vacuolar protein sorting-associated protein 60.2 vacuolar protein sorting-associated protein 60.1 vacuolar protein sorting-associated protein 60.1 vacuolar protein sorting-associated protein 60.1 vacuolar protein sorting-associated protein 60.2 vacuolar protein sorting-associated protein 60.2 vacuolar protein sorting-associated protein 60.1 vacuolar protein sorting-associated protein 60.2 vacuolar protein sorting-associated protein 60.1 vacuolar protein sorting-associated protein 60.2 charged multivesicular body protein 5-like charged multivesicular body protein 5-like vacuolar protein sorting-associated protein 60.2 vacuolar protein sorting-associated protein 60.1-like vacuolar protein sorting-associated protein 60.2 vacuolar protein sorting-associated protein 60.2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 6
tae03030 DNA replication 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 7
tae03250 Viral life cycle - HIV-1 3
tae03272 Virion - Hepatitis viruses 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 3
bdi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
osa00240 Pyrimidine metabolism 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 4
osa04136 Autophagy - other 3
osa04145 Phagosome 3
osa03250 Viral life cycle - HIV-1 2
osa00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 7
zma03250 Viral life cycle - HIV-1 4
zma03272 Virion - Hepatitis viruses 4
zma04130 SNARE interactions in vesicular transport 3
zma04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 5
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 4
sbi04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 4
ath04120 Ubiquitin mediated proteolysis 2
ath04141 Protein processing in endoplasmic reticulum 2
ath03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 5
ath04144 Endocytosis 3
ath04141 Protein processing in endoplasmic reticulum 2
ath00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
gma04144 Endocytosis 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 4
bra03250 Viral life cycle - HIV-1 2
bra03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 5
bra04145 Phagosome 4
bra04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00260 Glycine, serine and threonine metabolism 2
bra00630 Glyoxylate and dicarboxylate metabolism 2
bra00670 One carbon pool by folate 2
bra00785 Lipoic acid metabolism 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 7
vvi00190 Oxidative phosphorylation 2
vvi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 6
ppo03272 Virion - Hepatitis viruses 3
ppo04626 Plant-pathogen interaction 2
ppo03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 7
ppo04626 Plant-pathogen interaction 3
ppo03272 Virion - Hepatitis viruses 3
ppo04141 Protein processing in endoplasmic reticulum 2
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 12
ghi03272 Virion - Hepatitis viruses 4
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
ghi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 12
ghi03272 Virion - Hepatitis viruses 4
ghi04120 Ubiquitin mediated proteolysis 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 6
ghi04141 Protein processing in endoplasmic reticulum 6
ghi04144 Endocytosis 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 4
bna04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 5
bna04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 4
bna04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00280 Valine, leucine and isoleucine degradation 5
sot00410 beta-Alanine metabolism 5
sot00640 Propanoate metabolism 5
sot01200 Carbon metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 3
cit04136 Autophagy - other 2
cit03022 Basal transcription factors 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 5
nta00561 Glycerolipid metabolism 2
nta03250 Viral life cycle - HIV-1 2
nta03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 3
nta00220 Arginine biosynthesis 2
nta01210 2-Oxocarboxylic acid metabolism 2
nta01230 Biosynthesis of amino acids 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 2
nta01210 2-Oxocarboxylic acid metabolism 2
nta01230 Biosynthesis of amino acids 2
nta04144 Endocytosis 2
nta04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 7
cre03272 Virion - Hepatitis viruses 4
cre03250 Viral life cycle - HIV-1 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123068692 123184390 123442732 123441976 100825412 100841033 9266052 4337536 100284928 100273036 8066585 8072371 820233 830364 100527083 101248200 101259697 103859354 103847254 103855589 100244534 100240918 7469518 7490888 11418361 107904373 107904768 107915713 106428238 106389081 106358541 102585470 102578965 102631392 107813782 107793425 107803543 5719270
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