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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5  4337804  pentatricopeptide repeat-containing protein At3g05340 
 zma-u.5  100383629  pentatricopeptide repeat family protein 
 ath-u.5  AT3G05340  Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5  102660265  pentatricopeptide repeat-containing protein At3g05340 
 sly-u.5  101264978  pentatricopeptide repeat-containing protein At3g05340 
 ppo-u.5  7481754  pentatricopeptide repeat-containing protein At3g05340 
 mtr-u.5  11423164  pentatricopeptide repeat-containing protein At3g05340 

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Top 50 coexpressed genes to 4337804 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4337804 (osa-u.5 coexpression data)

CoexMap"123180451"


taeLOC123180451 | Entrez gene ID : 123180451
Species osa zma ath gma sly ppo mtr hvu vvi bna cit bra ghi sbi bdi nta tae cre sot
Paralog 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (1066 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (4004 genes)  IEA  
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044448435.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  chlo 2,  chlo_mito 2,  mito 1,  cyto_nucl 1,  cysk_nucl 1  (predict for XP_044448435.1)
Subcellular
localization
TargetP
other 7  (predict for XP_044448435.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

osa-u.5
for
4337804


zma-u.5
for
100383629


ath-u.5
for
AT3G05340


gma-u.5
for
102660265


sly-u.5
for
101264978


ppo-u.5
for
7481754


mtr-u.5
for
11423164



Ortholog ID: 11285
Species bdi osa zma sbi ath gma sly bra ppo mtr ghi ghi bna bna sot cit nta nta
Symbol LOC100838377 LOC4337804 LOC100383629 LOC8069489 AT3G05340 LOC102660265 LOC101264978 LOC103870830 LOC7481754 LOC11423164 LOC107918402 LOC107893588 LOC125587969 LOC106453044 LOC102578274 LOC102617836 LOC107787871 LOC107799140
Function* pentatricopeptide repeat-containing protein At3g05340 pentatricopeptide repeat-containing protein At3g05340 pentatricopeptide repeat family protein pentatricopeptide repeat-containing protein At3g05340 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g05340 pentatricopeptide repeat-containing protein At3g05340 pentatricopeptide repeat-containing protein At3g05340 pentatricopeptide repeat-containing protein At3g05340 pentatricopeptide repeat-containing protein At3g05340 pentatricopeptide repeat-containing protein At3g05340-like pentatricopeptide repeat-containing protein At3g05340 pentatricopeptide repeat-containing protein At3g05340-like pentatricopeptide repeat-containing protein At3g05340 pentatricopeptide repeat-containing protein At3g05340 pentatricopeptide repeat-containing protein At3g05340-like pentatricopeptide repeat-containing protein At3g05340-like pentatricopeptide repeat-containing protein At3g05340-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
cit00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00760 Nicotinate and nicotinamide metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00760 Nicotinate and nicotinamide metabolism 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100838377 4337804 100383629 8069489 819698 102660265 101264978 103870830 7481754 11423164 107918402 107893588 125587969 106453044 102578274 102617836 107787871 107799140
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