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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123180957   splicing factor 3B subunit 4 
 tae-r.2   123044715   splicing factor 3B subunit 4 
 tae-r.2   123119632   splicing factor 3B subunit 4 
 hvu-r.1   123430133   splicing factor 3B subunit 4 
 bdi-r.1   100822253   splicing factor 3B subunit 4 
 osa-u.5   4348798   uncharacterized LOC4348798 
 zma-u.5   100192006   uncharacterized LOC100192006 
 zma-u.5   100501457   RNA-binding (RRM/RBD/RNP motifs) family protein 
 sbi-r.1   8070527   splicing factor 3B subunit 4 
 ath-u.5   emb2444   RNA-binding (RRM/RBD/RNP motifs) family protein 
 gma-u.5   100792707   splicing factor 3B subunit 4 
 gma-u.5   100791039   splicing factor 3B subunit 4 
 sly-u.5   101244943   uncharacterized LOC101244943 
 bra-r.6   103837863   splicing factor 3B subunit 4 
 bra-r.6   103828385   splicing factor 3B subunit 4 
 vvi-u.5   100251324   uncharacterized LOC100251324 
 ppo-u.5   7473156   uncharacterized LOC7473156 
 mtr-u.5   11419010   splicing factor 3B subunit 4 
 ghi-r.1   107914295   splicing factor 3B subunit 4 
 ghi-r.1   107900636   splicing factor 3B subunit 4 
 bna-r.1   106435109   splicing factor 3B subunit 4 
 bna-r.1   106357716   splicing factor 3B subunit 4-like 
 bna-r.1   106359169   splicing factor 3B subunit 4-like 
 sot-r.1   102599002   splicing factor 3B subunit 4-like 
 sot-r.1   102590051   splicing factor 3B subunit 4-like 
 cit-r.1   102619931   uncharacterized LOC102619931 
 nta-r.1   107805053   uncharacterized LOC107805053 
 cre-r.1   CHLRE_06g254800v5   uncharacterized protein 

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Top 50 coexpressed genes to 123180957 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123180957 (tae-r.2 coexpression data)

CoexMap"123180957"


taeLOC123180957 | Entrez gene ID : 123180957    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 1 2 1 1 2 1 2 1 1 1 2 3 2 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes03040 [list] [network] Spliceosome (1516 genes)
GO BP
GO:0048026 [list] [network] positive regulation of mRNA splicing, via spliceosome  (3 genes)  IEA  
GO CC
GO:0071011 [list] [network] precatalytic spliceosome  (55 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (603 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (4004 genes)  IEA  
Protein XP_044449092.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 1,  E.R. 1,  pero 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_044449092.1)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for XP_044449092.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123180957
tae-r.2
for
123044715
tae-r.2
for
123119632
hvu-r.1
for
123430133
bdi-r.1
for
100822253
osa-u.5
for
4348798
zma-u.5
for
100192006
zma-u.5
for
100501457
sbi-r.1
for
8070527
ath-u.5
for
emb2444
gma-u.5
for
100792707
gma-u.5
for
100791039
sly-u.5
for
101244943
bra-r.6
for
103837863
bra-r.6
for
103828385
vvi-u.5
for
100251324
ppo-u.5
for
7473156
mtr-u.5
for
11419010
ghi-r.1
for
107914295
ghi-r.1
for
107900636
bna-r.1
for
106435109
bna-r.1
for
106357716
bna-r.1
for
106359169
sot-r.1
for
102599002
sot-r.1
for
102590051
cit-r.1
for
102619931
nta-r.1
for
107805053
cre-r.1
for
CHLRE_06g254800v5


Ortholog ID: 7919
Species tae tae tae hvu bdi osa zma zma sbi ath gma gma sly bra bra vvi ppo mtr ghi ghi bna bna bna sot sot cit nta cre
Symbol LOC123180957 LOC123044715 LOC123119632 LOC123430133 LOC100822253 LOC4348798 LOC100192006 LOC100501457 LOC8070527 emb2444 LOC100792707 LOC100791039 LOC101244943 LOC103837863 LOC103828385 LOC100251324 LOC7473156 LOC11419010 LOC107914295 LOC107900636 LOC106435109 LOC106359169 LOC106389683 LOC102599002 LOC102590051 LOC102619931 LOC107805053 CHLRE_06g254800v5
Function* splicing factor 3B subunit 4 splicing factor 3B subunit 4 splicing factor 3B subunit 4 splicing factor 3B subunit 4 splicing factor 3B subunit 4 uncharacterized LOC4348798 uncharacterized LOC100192006 RNA-binding (RRM/RBD/RNP motifs) family protein splicing factor 3B subunit 4 RNA-binding (RRM/RBD/RNP motifs) family protein splicing factor 3B subunit 4 splicing factor 3B subunit 4 uncharacterized LOC101244943 splicing factor 3B subunit 4 splicing factor 3B subunit 4 uncharacterized LOC100251324 uncharacterized LOC7473156 splicing factor 3B subunit 4 splicing factor 3B subunit 4 splicing factor 3B subunit 4 splicing factor 3B subunit 4 splicing factor 3B subunit 4-like splicing factor 3B subunit 4-like splicing factor 3B subunit 4-like splicing factor 3B subunit 4-like uncharacterized LOC102619931 uncharacterized LOC107805053 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 7
bdi03013 Nucleocytoplasmic transport 4
bdi03008 Ribosome biogenesis in eukaryotes 3
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 8
zma03013 Nucleocytoplasmic transport 4
zma03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 6
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 12
sbi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath04141 Protein processing in endoplasmic reticulum 4
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03018 RNA degradation 2
gma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
sly03015 mRNA surveillance pathway 3
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 5
bra03010 Ribosome 2
bra03040 Spliceosome 2
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
vvi00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03015 mRNA surveillance pathway 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 5
mtr03010 Ribosome 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03022 Basal transcription factors 2
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03022 Basal transcription factors 2
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
bna03010 Ribosome 4
bna03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna03013 Nucleocytoplasmic transport 3
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 12
cre03013 Nucleocytoplasmic transport 3
cre03015 mRNA surveillance pathway 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123180957 123044715 123119632 123430133 100822253 4348798 100192006 100501457 8070527 816366 100792707 100791039 101244943 103837863 103828385 100251324 7473156 11419010 107914295 107900636 106435109 106359169 106389683 102599002 102590051 102619931 107805053 5722138
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