ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
tae-r.2	123181159	vacuolar-sorting protein BRO1
tae-r.2	123046847	vacuolar-sorting protein BRO1
tae-r.2	123122313	vacuolar-sorting protein BRO1
tae-r.2	123181040	vacuolar-sorting protein BRO1
hvu-r.1	123432180	vacuolar-sorting protein BRO1
bdi-r.1	100833603	vacuolar-sorting protein BRO1
osa-u.5	4348999	vacuolar-sorting protein BRO1
zma-u.5	100383198	Endosomal targeting BRO1-like domain-containing protein
zma-u.5	100286189	ALG2-interacting protein X
sbi-r.1	8065814	ALG-2 interacting protein X
ath-u.5	AT1G15130	Endosomal targeting BRO1-like domain-containing protein
gma-u.5	100802927	vacuolar-sorting protein BRO1
gma-u.5	100795465	vacuolar-sorting protein BRO1
sly-u.5	101261621	vacuolar-sorting protein BRO1
sly-u.5	101245450	vacuolar-sorting protein BRO1-like
bra-r.6	103842916	vacuolar-sorting protein BRO1
bra-r.6	103872304	vacuolar-sorting protein BRO1
vvi-u.5	100245656	vacuolar-sorting protein BRO1
ppo-u.5	7488385	vacuolar-sorting protein BRO1
ppo-u.5	7475548	vacuolar-sorting protein BRO1
mtr-u.5	11440696	vacuolar-sorting protein BRO1
ghi-r.1	107948240	vacuolar-sorting protein BRO1
ghi-r.1	107909556	vacuolar-sorting protein BRO1
bna-r.1	106415315	vacuolar-sorting protein BRO1
bna-r.1	106367056	vacuolar-sorting protein BRO1
bna-r.1	106346688	vacuolar-sorting protein BRO1
sot-r.1	102584129	ALG-2 interacting protein X-like
sot-r.1	102601117	ALG-2 interacting protein X
cit-r.1	102623501	vacuolar-sorting protein BRO1
nta-r.1	107826739	vacuolar-sorting protein BRO1
nta-r.1	107780029	vacuolar-sorting protein BRO1-like
nta-r.1	107771400	vacuolar-sorting protein BRO1
cre-r.1	CHLRE_01g004350v5	uncharacterized protein

Top 50 coexpressed genes to 123181159 (tae-r.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123181159 (tae-r.2 coexpression data)

CoexMap"123181159"

[Cytoscape]

Annotation

functional annotation

KEGG

taes03250 [list] [network] Viral life cycle - HIV-1 (104 genes)

taes03272 [list] [network] Virion - Hepatitis viruses (35 genes)

taes04144 [list] [network] Endocytosis (447 genes)

GO BP

GO:0043328 [list] [network] protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway

(59 genes)

IEA

GO CC

GO:0005768 [list] [network] endosome

(407 genes)

IEA

GO MF

GO:0005515 [list] [network] protein binding

(16249 genes)

IEA

Protein

XP_044449337.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, nucl_plas 2, cyto 2, chlo 1, mito 1, vacu 1, E.R. 1, pero 1, chlo_mito 1, E.R._vacu 1

(predict for XP_044449337.1)

Subcellular
localization
TargetP

other 6, mito 3

(predict for XP_044449337.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123181159	tae-r.2 for 123046847	tae-r.2 for 123122313	tae-r.2 for 123181040	hvu-r.1 for 123432180	bdi-r.1 for 100833603	osa-u.5 for 4348999	zma-u.5 for 100383198	zma-u.5 for 100286189	sbi-r.1 for 8065814	ath-u.5 for AT1G15130	gma-u.5 for 100802927	gma-u.5 for 100795465	sly-u.5 for 101261621	sly-u.5 for 101245450	bra-r.6 for 103842916	bra-r.6 for 103872304	vvi-u.5 for 100245656	ppo-u.5 for 7488385	ppo-u.5 for 7475548	mtr-u.5 for 11440696	ghi-r.1 for 107948240	ghi-r.1 for 107909556	bna-r.1 for 106415315	bna-r.1 for 106367056	bna-r.1 for 106346688	sot-r.1 for 102584129	sot-r.1 for 102601117	cit-r.1 for 102623501	nta-r.1 for 107826739	nta-r.1 for 107780029	nta-r.1 for 107771400	cre-r.1 for CHLRE_01g004350v5

Ortholog

Ortholog ID: 6127

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

vacuolar-sorting protein BRO1

Endosomal targeting BRO1-like domain-containing protein

ALG2-interacting protein X

ALG-2 interacting protein X

Endosomal targeting BRO1-like domain-containing protein

vacuolar-sorting protein BRO1

vacuolar-sorting protein BRO1-like

vacuolar-sorting protein BRO1

ALG-2 interacting protein X-like

ALG-2 interacting protein X

vacuolar-sorting protein BRO1

ALG-2 interacting protein X-like

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03250	Viral life cycle - HIV-1	4
tae03272	Virion - Hepatitis viruses	4
tae04144	Endocytosis	4
tae04130	SNARE interactions in vesicular transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03250	Viral life cycle - HIV-1	4
tae03272	Virion - Hepatitis viruses	4
tae04144	Endocytosis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03250	Viral life cycle - HIV-1	4
tae03272	Virion - Hepatitis viruses	4
tae04144	Endocytosis	4
tae04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	3
hvu03250	Viral life cycle - HIV-1	2
hvu03272	Virion - Hepatitis viruses	2
hvu04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	2
bdi03250	Viral life cycle - HIV-1	2
bdi03272	Virion - Hepatitis viruses	2
bdi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04144	Endocytosis	7
zma04141	Protein processing in endoplasmic reticulum	2
zma03250	Viral life cycle - HIV-1	2
zma03272	Virion - Hepatitis viruses	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04144	Endocytosis	5
zma04141	Protein processing in endoplasmic reticulum	2
zma03250	Viral life cycle - HIV-1	2
zma03272	Virion - Hepatitis viruses	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04144	Endocytosis	3
sbi04141	Protein processing in endoplasmic reticulum	3
sbi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	4
gma04016	MAPK signaling pathway - plant	2
gma04075	Plant hormone signal transduction	2
gma04626	Plant-pathogen interaction	2
gma03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	4
gma03250	Viral life cycle - HIV-1	2
gma03272	Virion - Hepatitis viruses	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04626	Plant-pathogen interaction	2
sly04144	Endocytosis	2
sly04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	5
bra04144	Endocytosis	5
bra03250	Viral life cycle - HIV-1	2
bra03272	Virion - Hepatitis viruses	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	6
bra04144	Endocytosis	3
bra04120	Ubiquitin mediated proteolysis	2
bra03250	Viral life cycle - HIV-1	2
bra03272	Virion - Hepatitis viruses	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03250	Viral life cycle - HIV-1	2
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04144	Endocytosis	2
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	3
ppo03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03022	Basal transcription factors	2
ghi03250	Viral life cycle - HIV-1	2
ghi03272	Virion - Hepatitis viruses	2
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03022	Basal transcription factors	2
ghi03250	Viral life cycle - HIV-1	2
ghi03272	Virion - Hepatitis viruses	2
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	6
bna04075	Plant hormone signal transduction	6
bna03272	Virion - Hepatitis viruses	5
bna04144	Endocytosis	5
bna03250	Viral life cycle - HIV-1	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03272	Virion - Hepatitis viruses	5
bna04144	Endocytosis	5
bna03250	Viral life cycle - HIV-1	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03250	Viral life cycle - HIV-1	4
bna03272	Virion - Hepatitis viruses	4
bna04144	Endocytosis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	3
sot03250	Viral life cycle - HIV-1	2
sot03272	Virion - Hepatitis viruses	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	6
sot04142	Lysosome	3
sot05100	Bacterial invasion of epithelial cells	3
sot03250	Viral life cycle - HIV-1	2
sot03272	Virion - Hepatitis viruses	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04144	Endocytosis	5
cit04141	Protein processing in endoplasmic reticulum	3
cit03250	Viral life cycle - HIV-1	2
cit03272	Virion - Hepatitis viruses	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03250	Viral life cycle - HIV-1	2
nta03272	Virion - Hepatitis viruses	2
nta04144	Endocytosis	2
nta00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	12
nta05100	Bacterial invasion of epithelial cells	6
nta04142	Lysosome	4
nta03250	Viral life cycle - HIV-1	2
nta03272	Virion - Hepatitis viruses	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03250	Viral life cycle - HIV-1	2
nta03272	Virion - Hepatitis viruses	2
nta04144	Endocytosis	2
nta00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04144	Endocytosis	6
cre03250	Viral life cycle - HIV-1	3
cre03272	Virion - Hepatitis viruses	3

Expression

Expression pattern

Entrez Gene ID^*

123181159

123046847

123122313

123432180

100833603

4348999

100383198

100286189

8065814

838077

100802927

100795465

101261621

101245450

103842916

103872304

100245656

7488385

7475548

11440696

107948240

107909556

106415315

106367056

106346688

102584129

102601117

102623501

107826739

107771400

107770763

5727677

The preparation time of this page was 0.2 [sec].


Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	1	1	1	2	1	1	2	2	2	1	2	1	2	3	2	1	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123181159 (tae-r.2 coexpression data)

Top 50 enrichment test to 123181159 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**