ATTED-II : GeneCoexpression result

Species	Gene	Description
tae-r.2	123181627	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3
tae-r.2	123051911	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3
tae-r.2	123127931	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3
hvu-r.1	123438725	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like
bdi-r.1	100831656	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3
zma-u.5	100276291	uncharacterized LOC100276291
sbi-r.1	8055616	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3
ath-u.5	AT2G44525	NADH dehydrogenase ubiquinone 1 alpha subcomplex assembly factor-like protein (DUF498/DUF598)
ath-u.5	AT3G60150	NADH dehydrogenase ubiquinone 1 alpha subcomplex assembly factor-like protein (DUF498/DUF598)
gma-u.5	100816956	uncharacterized LOC100816956
sly-u.5	101266454	uncharacterized LOC101266454
bra-r.6	103866810	uncharacterized LOC103866810
bra-r.6	103862904	uncharacterized LOC103862904
vvi-u.5	100249656	uncharacterized LOC100249656
ppo-u.5	7469387	uncharacterized LOC7469387
mtr-u.5	25500167	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3
ghi-r.1	107948577	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3
ghi-r.1	107896300	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3
bna-r.1	106375304	uncharacterized LOC106375304
bna-r.1	106396849	uncharacterized LOC106396849
bna-r.1	106445111	uncharacterized LOC106445111
sot-r.1	102605995	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3
cit-r.1	102631083	uncharacterized LOC102631083
nta-r.1	107829281	uncharacterized LOC107829281
nta-r.1	107780481	uncharacterized LOC107780481
cre-r.1	CHLRE_12g496800v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0032981 [list] [network] mitochondrial respiratory chain complex I assembly

(33 genes)

IEA

GO CC

GO:0005743 [list] [network] mitochondrial inner membrane

(341 genes)

IEA

GO MF

Protein

XP_044449875.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, cyto 4, cyto_nucl 4

(predict for XP_044449875.1)

Subcellular
localization
TargetP

other 8

(predict for XP_044449875.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123181627	tae-r.2 for 123051911	tae-r.2 for 123127931	hvu-r.1 for 123438725	bdi-r.1 for 100831656	zma-u.5 for 100276291	sbi-r.1 for 8055616	ath-u.5 for AT2G44525	ath-u.5 for AT3G60150	gma-u.5 for 100816956	sly-u.5 for 101266454	bra-r.6 for 103866810	bra-r.6 for 103862904	vvi-u.5 for 100249656	ppo-u.5 for 7469387	mtr-u.5 for 25500167	ghi-r.1 for 107948577	ghi-r.1 for 107896300	bna-r.1 for 106375304	bna-r.1 for 106396849	bna-r.1 for 106445111	sot-r.1 for 102605995	cit-r.1 for 102631083	nta-r.1 for 107829281	nta-r.1 for 107780481	cre-r.1 for CHLRE_12g496800v5

Ortholog

Ortholog ID: 8430

Species

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3

uncharacterized LOC100276291

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3

NADH dehydrogenase ubiquinone 1 alpha subcomplex assembly factor-like protein (DUF498/DUF598)

uncharacterized LOC100816956

uncharacterized LOC101266454

uncharacterized LOC103866810

uncharacterized LOC103862904

uncharacterized LOC100249656

uncharacterized LOC7469387

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3

uncharacterized LOC106375304

uncharacterized LOC106445111

uncharacterized LOC106450790

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3

uncharacterized LOC102631083

uncharacterized LOC107829281

uncharacterized LOC107780481

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	2
tae03030	DNA replication	2
tae03410	Base excision repair	2
tae03420	Nucleotide excision repair	2
tae03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03030	DNA replication	3
tae03410	Base excision repair	3
tae03420	Nucleotide excision repair	3
tae03430	Mismatch repair	3
tae03440	Homologous recombination	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03030	DNA replication	2
tae03410	Base excision repair	2
tae03420	Nucleotide excision repair	2
tae03430	Mismatch repair	2
tae03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00190	Oxidative phosphorylation	6
hvu04145	Phagosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	4
zma03010	Ribosome	3
zma03013	Nucleocytoplasmic transport	2
zma03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00280	Valine, leucine and isoleucine degradation	4
ath00640	Propanoate metabolism	3
ath00785	Lipoic acid metabolism	3
ath01210	2-Oxocarboxylic acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00190	Oxidative phosphorylation	2
vvi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	5
ghi03272	Virion - Hepatitis viruses	4
ghi00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	5
ghi03272	Virion - Hepatitis viruses	2
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04142	Lysosome	4
bna04130	SNARE interactions in vesicular transport	4
bna00770	Pantothenate and CoA biosynthesis	2
bna01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04142	Lysosome	4
bna04130	SNARE interactions in vesicular transport	4
bna03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	2
sot04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00230	Purine metabolism	2
cit00280	Valine, leucine and isoleucine degradation	2

Expression

Expression pattern

Entrez Gene ID^*

123181627

123051911

123127931

123438725

100831656

100276291

8055616

819060

825185

100816956

101266454

103866810

103862904

100249656

7469387

25500167

107948577

107896300

106375304

106445111

106450790

102605995

102631083

107829281

107780481

5727908

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 123181627 (tae-r.2 coexpression data)

Top 50 enrichment test to 123181627 (tae-r.2 coexpression data)


Species	tae	hvu	bdi	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre	osa
Paralog	3	1	1	1	1	2	1	1	2	1	1	1	2	3	1	1	2	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123181627 (tae-r.2 coexpression data)

Top 50 enrichment test to 123181627 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**