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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123187396   BRCT domain-containing protein At4g02110 
 tae-r.2   123043588   BRCT domain-containing protein At4g02110 
 tae-r.2   123046156   BRCT domain-containing protein At4g02110 
 tae-r.2   123051457   uncharacterized LOC123051457 
 hvu-r.1   123427370   BRCT domain-containing protein At4g02110-like 
 hvu-r.1   123424638   BRCT domain-containing protein At4g02110-like 
 hvu-r.1   123406037   BRCT domain-containing protein At4g02110-like 
 bdi-r.1   100841278   BRCT domain-containing protein At4g02110 
 osa-u.5   4332589   BRCT domain-containing protein At4g02110 
 osa-u.5   4344363   BRCT domain-containing protein At4g02110-like 
 zma-u.5   103634545   uncharacterized LOC103634545 
 zma-u.5   100216554   BRCT domain-containing protein 
 sbi-r.1   8077514   BRCT domain-containing protein At4g02110 
 sbi-r.1   8081086   BRCT domain-containing protein At4g02110 
 ath-u.5   AT4G02110   transcription coactivator 
 gma-u.5   100799144   BRCT domain-containing protein 
 gma-u.5   100783461   BRCT domain-containing protein 
 sly-u.5   101248303   BRCT domain-containing protein At4g02110 
 bra-r.6   103828938   BRCT domain-containing protein At4g02110 
 ppo-u.5   7460448   BRCT domain-containing protein At4g02110 
 ppo-u.5   7491267   BRCT domain-containing protein At4g02110 
 mtr-u.5   11412949   BRCT domain-containing protein At4g02110 
 ghi-r.1   107925697   BRCT domain-containing protein At4g02110 
 ghi-r.1   107946035   BRCT domain-containing protein At4g02110 
 bna-r.1   106438665   BRCT domain-containing protein At4g02110-like 
 bna-r.1   106388806   BRCT domain-containing protein At4g02110-like 
 sot-r.1   102603882   BRCT domain-containing protein At4g02110-like 
 sot-r.1   102594563   BRCT domain-containing protein At4g02110 
 cit-r.1   102624568   BRCT domain-containing protein At4g02110 
 nta-r.1   107766698   BRCT domain-containing protein At4g02110-like 
 nta-r.1   107765913   BRCT domain-containing protein At4g02110-like 
 nta-r.1   107759454   BRCT domain-containing protein At4g02110-like 
 cre-r.1   CHLRE_03g158464v5   uncharacterized protein 

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Top 50 coexpressed genes to 123187396 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123187396 (tae-r.2 coexpression data)

CoexMap"123187396"


taeLOC123187396 | Entrez gene ID : 123187396    
Species tae hvu bdi osa zma sbi ath gma sly bra ppo mtr ghi bna sot cit nta cre vvi
Paralog 4 3 1 2 2 2 1 2 1 1 2 1 2 2 2 1 3 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes03440 [list] [network] Homologous recombination (198 genes)
GO BP
GO CC
GO MF
Protein XP_044455187.1 [sequence] [blastp]
XP_044455188.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_044455187.1)
nucl 9  (predict for XP_044455188.1)
Subcellular
localization
TargetP
other 9  (predict for XP_044455187.1)
other 9  (predict for XP_044455188.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123187396
tae-r.2
for
123043588
tae-r.2
for
123046156
tae-r.2
for
123051457
hvu-r.1
for
123427370
hvu-r.1
for
123424638
hvu-r.1
for
123406037
bdi-r.1
for
100841278
osa-u.5
for
4332589
osa-u.5
for
4344363
zma-u.5
for
103634545
zma-u.5
for
100216554
sbi-r.1
for
8077514
sbi-r.1
for
8081086
ath-u.5
for
AT4G02110
gma-u.5
for
100799144
gma-u.5
for
100783461
sly-u.5
for
101248303
bra-r.6
for
103828938
ppo-u.5
for
7460448
ppo-u.5
for
7491267
mtr-u.5
for
11412949
ghi-r.1
for
107925697
ghi-r.1
for
107946035
bna-r.1
for
106438665
bna-r.1
for
106388806
sot-r.1
for
102603882
sot-r.1
for
102594563
cit-r.1
for
102624568
nta-r.1
for
107766698
nta-r.1
for
107765913
nta-r.1
for
107759454
cre-r.1
for
CHLRE_03g158464v5


Ortholog ID: 4948
Species tae tae tae hvu hvu hvu bdi osa osa zma zma sbi sbi ath gma gma sly bra ppo ppo mtr ghi ghi bna bna sot sot cit nta nta nta cre
Symbol LOC123043588 LOC123046156 LOC123136092 LOC123427370 LOC123424638 LOC123406037 LOC100841278 LOC4332589 LOC4344363 LOC103634545 LOC100216554 LOC8077514 LOC8081086 AT4G02110 LOC100799144 LOC100783461 LOC101248303 LOC103828938 LOC7460448 LOC7491267 LOC11412949 LOC107925697 LOC107946035 LOC106438665 LOC106388806 LOC102603882 LOC102594563 LOC102624568 LOC107765913 LOC107759454 LOC142179332 CHLRE_03g158464v5
Function* BRCT domain-containing protein At4g02110 BRCT domain-containing protein At4g02110 BRCT domain-containing protein At4g02110 BRCT domain-containing protein At4g02110-like BRCT domain-containing protein At4g02110-like BRCT domain-containing protein At4g02110-like BRCT domain-containing protein At4g02110 BRCT domain-containing protein At4g02110 BRCT domain-containing protein At4g02110-like uncharacterized LOC103634545 BRCT domain-containing protein BRCT domain-containing protein At4g02110 BRCT domain-containing protein At4g02110 transcription coactivator BRCT domain-containing protein BRCT domain-containing protein BRCT domain-containing protein At4g02110 BRCT domain-containing protein At4g02110 BRCT domain-containing protein At4g02110 BRCT domain-containing protein At4g02110 BRCT domain-containing protein At4g02110 BRCT domain-containing protein At4g02110 BRCT domain-containing protein At4g02110 BRCT domain-containing protein At4g02110-like BRCT domain-containing protein At4g02110-like BRCT domain-containing protein At4g02110-like BRCT domain-containing protein At4g02110 BRCT domain-containing protein At4g02110 BRCT domain-containing protein At4g02110-like BRCT domain-containing protein At4g02110-like BRCT domain-containing protein At4g02110-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03460 Fanconi anemia pathway 6
tae03440 Homologous recombination 5
tae03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
hvu03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 8
bdi03440 Homologous recombination 3
bdi03460 Fanconi anemia pathway 2
bdi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04814 Motor proteins 2
osa03440 Homologous recombination 2
osa03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 3
zma00270 Cysteine and methionine metabolism 2
zma03082 ATP-dependent chromatin remodeling 2
zma03430 Mismatch repair 2
zma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 6
ath03460 Fanconi anemia pathway 5
ath03030 DNA replication 3
ath03420 Nucleotide excision repair 3
ath03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00230 Purine metabolism 3
gma00240 Pyrimidine metabolism 3
gma00480 Glutathione metabolism 3
gma01232 Nucleotide metabolism 3
gma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00240 Pyrimidine metabolism 4
gma01232 Nucleotide metabolism 4
gma03030 DNA replication 3
gma03440 Homologous recombination 3
gma00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03440 Homologous recombination 3
sly03460 Fanconi anemia pathway 2
sly03410 Base excision repair 2
sly03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03440 Homologous recombination 2
bra03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 5
ppo03440 Homologous recombination 4
ppo01230 Biosynthesis of amino acids 2
ppo03410 Base excision repair 2
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 3
mtr04814 Motor proteins 3
mtr03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 5
ghi03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 4
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 5
bna03460 Fanconi anemia pathway 5
bna03030 DNA replication 3
bna03420 Nucleotide excision repair 3
bna03430 Mismatch repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 6
bna03460 Fanconi anemia pathway 6
bna00230 Purine metabolism 4
bna00240 Pyrimidine metabolism 4
bna00480 Glutathione metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03440 Homologous recombination 4
sot03030 DNA replication 4
sot03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03440 Homologous recombination 4
sot03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123043588 123046156 123136092 123427370 123424638 123406037 100841278 4332589 4344363 103634545 100216554 8077514 8081086 828135 100799144 100783461 101248303 103828938 7460448 7491267 11412949 107925697 107946035 106438665 106388806 102603882 102594563 102624568 107765913 107759454 142179332 5723024
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