ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
tae-r.2	123188407	rab GTPase-activating protein 22
tae-r.2	123155701	rab GTPase-activating protein 22
tae-r.2	123044649	rab GTPase-activating protein 22
hvu-r.1	123404178	TBC1 domain family member 15-like
hvu-r.1	123395293	rab GTPase-activating protein 22-like
hvu-r.1	123425844	rab GTPase-activating protein 22-like
bdi-r.1	100842425	TBC1 domain family member 15
bdi-r.1	100838197	TBC1 domain family member 17
bdi-r.1	100822716	TBC1 domain family member 15
osa-u.5	4331097	rab GTPase-activating protein 22
osa-u.5	4343429	rab GTPase-activating protein 22
osa-u.5	4350806	TBC1 domain family member 15
zma-u.5	100281478	TBC domain containing protein
zma-u.5	100281686	uncharacterized LOC100281686
zma-u.5	100282248	TBC domain containing protein
sbi-r.1	8084683	TBC1 domain family member 15
sbi-r.1	8084059	GTPase-activating protein GYP7
sbi-r.1	8059226	GTPase-activating protein GYP7
ath-u.5	AT2G20440	Ypt/Rab-GAP domain of gyp1p superfamily protein
ath-u.5	AT4G27100	Ypt/Rab-GAP domain of gyp1p superfamily protein
ath-u.5	AT4G28550	Ypt/Rab-GAP domain of gyp1p superfamily protein
gma-u.5	100789903	rab GTPase-activating protein 22
gma-u.5	100785775	rab GTPase-activating protein 22
sly-u.5	101265340	rab GTPase-activating protein 22
sly-u.5	101254845	rab GTPase-activating protein 22
bra-r.6	103857028	TBC1 domain family member 15-like
bra-r.6	103851940	TBC1 domain family member 15
bra-r.6	103838012	TBC1 domain family member 15
vvi-u.5	100251529	rab GTPase-activating protein 22
vvi-u.5	100250247	rab GTPase-activating protein 22
ppo-u.5	7470936	uncharacterized LOC7470936
ppo-u.5	7454359	uncharacterized LOC7454359
ppo-u.5	18095918	uncharacterized LOC18095918
mtr-u.5	11443375	TBC1 domain family member 17
mtr-u.5	11415615	rab GTPase-activating protein 22
mtr-u.5	25484234	rab GTPase-activating protein 22
ghi-r.1	107898731	rab GTPase-activating protein 22
ghi-r.1	107919870	rab GTPase-activating protein 22
ghi-r.1	107923013	rab GTPase-activating protein 22
bna-r.1	106420903	TBC1 domain family member 15-like
bna-r.1	106377765	rab GTPase-activating protein 22
bna-r.1	106366412	TBC1 domain family member 15
sot-r.1	102593033	TBC1 domain family member 15-like
sot-r.1	102588158	TBC1 domain family member 15
sot-r.1	102605290	GTPase-activating protein GYP7-like
cit-r.1	102629477	rab GTPase-activating protein 22
cit-r.1	102609838	rab GTPase-activating protein 22-like
nta-r.1	107799457	uncharacterized LOC107799457
nta-r.1	107803323	uncharacterized LOC107803323
nta-r.1	107792990	rab GTPase-activating protein 22

Top 50 coexpressed genes to 123188407 (tae-r.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123188407 (tae-r.2 coexpression data)

CoexMap"123188407"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0090630 [list] [network] activation of GTPase activity

(43 genes)

IEA

GO CC

GO MF

GO:0005096 [list] [network] GTPase activator activity

(160 genes)

IEA

Protein

XP_044456432.1 [sequence] [blastp]
XP_044456433.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 7, chlo 1, nucl 1, mito 1, vacu 1, chlo_mito 1	(predict for XP_044456432.1)
cyto 6, nucl 1, chlo 1, mito 1, vacu 1, chlo_mito 1, cysk_nucl 1, nucl_plas 1	(predict for XP_044456433.1)

Subcellular
localization
TargetP

other 9	(predict for XP_044456432.1)
other 9	(predict for XP_044456433.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123188407	tae-r.2 for 123155701	tae-r.2 for 123044649	hvu-r.1 for 123404178	hvu-r.1 for 123395293	hvu-r.1 for 123425844	bdi-r.1 for 100842425	bdi-r.1 for 100838197	bdi-r.1 for 100822716	osa-u.5 for 4331097	osa-u.5 for 4343429	osa-u.5 for 4350806	zma-u.5 for 100281478	zma-u.5 for 100281686	zma-u.5 for 100282248	sbi-r.1 for 8084683	sbi-r.1 for 8084059	sbi-r.1 for 8059226	ath-u.5 for AT2G20440	ath-u.5 for AT4G27100	ath-u.5 for AT4G28550	gma-u.5 for 100789903	gma-u.5 for 100785775	sly-u.5 for 101265340	sly-u.5 for 101254845	bra-r.6 for 103857028	bra-r.6 for 103851940	bra-r.6 for 103838012	vvi-u.5 for 100251529	vvi-u.5 for 100250247	ppo-u.5 for 7470936	ppo-u.5 for 7454359	ppo-u.5 for 18095918	mtr-u.5 for 11443375	mtr-u.5 for 11415615	mtr-u.5 for 25484234	ghi-r.1 for 107898731	ghi-r.1 for 107919870	ghi-r.1 for 107923013	bna-r.1 for 106420903	bna-r.1 for 106377765	bna-r.1 for 106366412	sot-r.1 for 102593033	sot-r.1 for 102588158	sot-r.1 for 102605290	cit-r.1 for 102629477	cit-r.1 for 102609838	nta-r.1 for 107799457	nta-r.1 for 107803323	nta-r.1 for 107792990

Ortholog

Ortholog ID: 946

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

rab GTPase-activating protein 22

TBC1 domain family member 15-like

rab GTPase-activating protein 22-like

TBC1 domain family member 15

TBC1 domain family member 17

TBC1 domain family member 15

rab GTPase-activating protein 22

TBC1 domain family member 15

TBC domain containing protein

uncharacterized LOC100281686

Ypt/Rab-GAP domain of gyp1p superfamily protein

TBC1 domain family member 15

GTPase-activating protein GYP7

Ypt/Rab-GAP domain of gyp1p superfamily protein

rab GTPase-activating protein 22

TBC1 domain family protein

TBC1 domain family member 15-like

TBC1 domain family member 15

rab GTPase-activating protein 22

uncharacterized LOC7470936

uncharacterized LOC7454359

uncharacterized LOC18095918

TBC1 domain family member 17

rab GTPase-activating protein 22

TBC1 domain family member 15

rab GTPase-activating protein 22

TBC1 domain family member 15

TBC1 domain family member 15-like

rab GTPase-activating protein 22

rab GTPase-activating protein 22-like

rab GTPase-activating protein 22

rab GTPase-activating protein 22-like

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03460	Fanconi anemia pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03460	Fanconi anemia pathway	3
tae00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00564	Glycerophospholipid metabolism	2
bdi04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00270	Cysteine and methionine metabolism	2
osa04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00040	Pentose and glucuronate interconversions	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	2
osa04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00562	Inositol phosphate metabolism	2
sbi04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	2
sbi04145	Phagosome	2
sbi04148	Efferocytosis	2
sbi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04626	Plant-pathogen interaction	2
gma00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00030	Pentose phosphate pathway	2
sly01200	Carbon metabolism	2
sly01230	Biosynthesis of amino acids	2
sly04075	Plant hormone signal transduction	2
sly00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	3
sly03083	Polycomb repressive complex	3
sly04712	Circadian rhythm - plant	3
sly00440	Phosphonate and phosphinate metabolism	2
sly00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	2
bra04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00100	Steroid biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00520	Amino sugar and nucleotide sugar metabolism	2
vvi01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01230	Biosynthesis of amino acids	3
ppo00670	One carbon pool by folate	3
ppo00270	Cysteine and methionine metabolism	2
ppo04981	Folate transport and metabolism	2
ppo00260	Glycine, serine and threonine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00250	Alanine, aspartate and glutamate metabolism	3
mtr01200	Carbon metabolism	3
mtr00460	Cyanoamino acid metabolism	2
mtr00270	Cysteine and methionine metabolism	2
mtr00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	2
mtr04626	Plant-pathogen interaction	2
mtr04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03018	RNA degradation	4
ghi03040	Spliceosome	4
ghi04146	Peroxisome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00230	Purine metabolism	2
ghi00240	Pyrimidine metabolism	2
ghi00760	Nicotinate and nicotinamide metabolism	2
ghi01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00280	Valine, leucine and isoleucine degradation	2
bna00410	beta-Alanine metabolism	2
bna00640	Propanoate metabolism	2
bna01200	Carbon metabolism	2
bna04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03013	Nucleocytoplasmic transport	3
cit03040	Spliceosome	3
cit03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00564	Glycerophospholipid metabolism	2
nta03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00564	Glycerophospholipid metabolism	2
nta03015	mRNA surveillance pathway	2

Expression

Expression pattern

Entrez Gene ID^*

123044649

123114529

123124023

123404178

123395293

123425844

100842425

100838197

100822716

4331097

4343429

4350806

100281478

100281686

100304435

8084683

8084059

8059226

816563

828818

828973

100789903

100785775

100810054

101261487

101251919

103857028

103838012

103834753

100251529

100250247

7470936

7454359

18095918

11443375

11415615

25484234

107923013

107955526

106377765

106445611

106444815

102593033

102590976

102589093

102629477

102609838

107792990

107830819

107810450

The preparation time of this page was 0.2 [sec].


Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	3	3	3	3	3	3	2	2	3	2	3	3	3	3	3	2	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123188407 (tae-r.2 coexpression data)

Top 50 enrichment test to 123188407 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**