Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123190664   protein UXT homolog 
 osa-u.5   4342470   pentatricopeptide repeat-containing protein At3g62890 
 zma-u.5   103631971   pentatricopeptide repeat-containing protein At3g62890 
 mtr-u.5   25491007   pentatricopeptide repeat-containing protein At5g48910 

close


Top 50 coexpressed genes to 123190664 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 123190664 (tae-r.2 coexpression data)

CoexMap"123190664"


taeLOC123190664 | Entrez gene ID : 123190664    
Species tae osa zma mtr hvu vvi sly cit bra ghi ppo sbi bdi ath nta gma bna cre sot
Paralog 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (367 genes)  IEA  
GO:0009451 [list] [network] RNA modification  (1066 genes)  IEA  
GO CC
GO:0016592 [list] [network] mediator complex  (119 genes)  IEA  
GO MF
GO:0003712 [list] [network] transcription coregulator activity  (352 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (2838 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (4004 genes)  IEA  
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044459284.1 [sequence] [blastp]
XP_044459286.1 [sequence] [blastp]
XP_044459287.1 [sequence] [blastp]
XP_044459288.1 [sequence] [blastp]
XP_044459289.1 [sequence] [blastp]
XP_044459290.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 1,  cyto 1,  mito 1,  pero 1,  cyto_nucl 1,  cyto_pero 1  (predict for XP_044459284.1)
chlo 4,  nucl 1,  cyto 1,  mito 1,  pero 1,  cyto_nucl 1,  cyto_pero 1  (predict for XP_044459286.1)
chlo 4,  nucl 1,  cyto 1,  mito 1,  pero 1,  cyto_nucl 1,  cyto_pero 1  (predict for XP_044459287.1)
cyto 3,  chlo 2,  mito 2,  cyto_nucl 2,  chlo_mito 2  (predict for XP_044459288.1)
cyto 6,  cyto_nucl 4,  nucl 1,  cysk_nucl 1  (predict for XP_044459289.1)
cyto 6,  cyto_nucl 4,  nucl 1,  cysk_nucl 1  (predict for XP_044459290.1)
Subcellular
localization
TargetP
other 4,  mito 3  (predict for XP_044459284.1)
other 4,  mito 3  (predict for XP_044459286.1)
other 4,  mito 3  (predict for XP_044459287.1)
mito 5  (predict for XP_044459288.1)
other 7  (predict for XP_044459289.1)
other 7  (predict for XP_044459290.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123190664
osa-u.5
for
4342470
zma-u.5
for
103631971
mtr-u.5
for
25491007


Ortholog ID: 15330
Species tae hvu bdi osa zma sbi mtr
Symbol LOC123190664 LOC123428831 LOC100830382 LOC4342470 LOC103631971 LOC8086440 LOC25491007
Function* protein UXT homolog pentatricopeptide repeat-containing protein At3g62890-like pentatricopeptide repeat-containing protein At3g62890 pentatricopeptide repeat-containing protein At3g62890 pentatricopeptide repeat-containing protein At3g62890 pentatricopeptide repeat-containing protein At3g62890 pentatricopeptide repeat-containing protein At5g48910
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123190664 123428831 100830382 4342470 103631971 8086440 25491007
The preparation time of this page was 0.1 [sec].