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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25491007   pentatricopeptide repeat-containing protein At5g48910 
 mtr-r.5   25491007   pentatricopeptide repeat-containing protein At5g48910 
 osa-u.5   4342470   pentatricopeptide repeat-containing protein At3g62890 
 zma-u.5   103631971   pentatricopeptide repeat-containing protein At3g62890 

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Top 50 coexpressed genes to 25491007 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25491007 (mtr-u.5 coexpression data)

CoexMap"25491007"


mtrLOC25491007 | Entrez gene ID : 25491007      
Species mtr osa zma sly bna ghi gma sbi nta cre bra cit vvi ppo hvu bdi sot tae ath
Paralog 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (432 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1400 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5045 genes)  IEA  
Protein XP_013460375.1 [sequence] [blastp]
XP_024634123.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  chlo_mito 5,  mito 1  (predict for XP_013460375.1)
chlo 8,  chlo_mito 5,  mito 1  (predict for XP_024634123.1)
Subcellular
localization
TargetP
other 5,  chlo 4  (predict for XP_013460375.1)
other 5,  chlo 4  (predict for XP_024634123.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25491007

.
mtr-r.5
for
25491007

.
osa-u.5
for
4342470

.
zma-u.5
for
103631971

.


Ortholog ID: 15330
Species osa zma mtr tae hvu sbi bdi
Symbol LOC4342470 LOC103631971 LOC25491007 LOC123190664 LOC123428831 LOC8086440 LOC100830382
Function* pentatricopeptide repeat-containing protein At3g62890 pentatricopeptide repeat-containing protein At3g62890 pentatricopeptide repeat-containing protein At5g48910 protein UXT homolog pentatricopeptide repeat-containing protein At3g62890-like pentatricopeptide repeat-containing protein At3g62890 pentatricopeptide repeat-containing protein At3g62890
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4342470 103631971 25491007 123190664 123428831 8086440 100830382
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