ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
tae-r.2	123191135	protein SYM1
tae-r.2	123042863	protein SYM1
tae-r.2	123113411	protein SYM1
tae-r.2	123055311	protein SYM1
hvu-r.1	123449048	uncharacterized LOC123449048
hvu-r.1	123426040	protein SYM1-like
bdi-r.1	100846887	uncharacterized LOC100846887
osa-u.5	4333336	uncharacterized LOC4333336
osa-u.5	4346695	protein SYM1
zma-u.5	100285035	mpv17 / PMP22 family protein
zma-u.5	100216568	uncharacterized LOC100216568
sbi-r.1	8064554	uncharacterized LOC8064554
ath-u.5	AT4G03410	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein
ath-u.5	AT1G52870	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein
gma-u.5	106798699	uncharacterized LOC106798699
gma-u.5	100805057	uncharacterized LOC100805057
gma-u.5	100789384	protein SYM1
sly-u.5	101259677	protein SYM1
sly-u.5	101247444	uncharacterized LOC101247444
bra-r.6	103858698	protein SYM1
bra-r.6	103871177	uncharacterized LOC103871177
vvi-u.5	100258564	uncharacterized LOC100258564
vvi-u.5	100253839	uncharacterized LOC100253839
ppo-u.5	18108584	uncharacterized LOC18108584
ppo-u.5	18095627	protein SYM1
ppo-u.5	7460845	uncharacterized LOC7460845
mtr-u.5	25487391	uncharacterized LOC25487391
mtr-u.5	25487620	protein SYM1
ghi-r.1	107903543	uncharacterized LOC107903543
ghi-r.1	107925395	peroxisomal membrane protein 2
ghi-r.1	107952157	uncharacterized LOC107952157
bna-r.1	125588745	uncharacterized LOC125588745
bna-r.1	106438733	protein SYM1
bna-r.1	BNAC06G05870D	uncharacterized BNAC06G05870D
sot-r.1	102595985	protein SYM1-like
sot-r.1	102590255	uncharacterized LOC102590255
cit-r.1	102611604	hypothetical protein
cit-r.1	102614505	uncharacterized LOC102614505
nta-r.1	107799776	uncharacterized LOC107799776
nta-r.1	107789335	uncharacterized LOC107789335
nta-r.1	107805063	uncharacterized LOC107805063
cre-r.1	CHLRE_06g297900v5	uncharacterized protein

Top 50 coexpressed genes to 123191135 (tae-r.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123191135 (tae-r.2 coexpression data)

CoexMap"123191135"

[Cytoscape]

Annotation

functional annotation

KEGG

taes04146 [list] [network] Peroxisome (287 genes)

GO BP

GO CC

GO:0016020 [list] [network] membrane	(10843 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(13575 genes)	IEA

GO MF

Protein

XP_044459851.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 8, mito 1

(predict for XP_044459851.1)

Subcellular
localization
TargetP

mito 7, chlo 6

(predict for XP_044459851.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123191135	tae-r.2 for 123042863	tae-r.2 for 123113411	tae-r.2 for 123055311	hvu-r.1 for 123449048	hvu-r.1 for 123426040	bdi-r.1 for 100846887	osa-u.5 for 4333336	osa-u.5 for 4346695	zma-u.5 for 100285035	zma-u.5 for 100216568	sbi-r.1 for 8064554	ath-u.5 for AT4G03410	ath-u.5 for AT1G52870	gma-u.5 for 106798699	gma-u.5 for 100805057	gma-u.5 for 100789384	sly-u.5 for 101259677	sly-u.5 for 101247444	bra-r.6 for 103858698	bra-r.6 for 103871177	vvi-u.5 for 100258564	vvi-u.5 for 100253839	ppo-u.5 for 18108584	ppo-u.5 for 18095627	ppo-u.5 for 7460845	mtr-u.5 for 25487391	mtr-u.5 for 25487620	ghi-r.1 for 107903543	ghi-r.1 for 107925395	ghi-r.1 for 107952157	bna-r.1 for 125588745	bna-r.1 for 106438733	bna-r.1 for BNAC06G05870D	sot-r.1 for 102595985	sot-r.1 for 102590255	cit-r.1 for 102611604	cit-r.1 for 102614505	nta-r.1 for 107799776	nta-r.1 for 107789335	nta-r.1 for 107805063	cre-r.1 for CHLRE_06g297900v5

Ortholog

Ortholog ID: 3602

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

protein SYM1

uncharacterized LOC123449048

protein SYM1-like

uncharacterized LOC100846887

uncharacterized LOC4333336

protein SYM1

mpv17 / PMP22 family protein

uncharacterized LOC100216568

uncharacterized LOC8064554

Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein

uncharacterized LOC106798699

protein SYM1

uncharacterized LOC100786706

protein SYM1

uncharacterized LOC101247444

protein SYM1

uncharacterized LOC103871177

uncharacterized LOC100258564

uncharacterized LOC100253839

uncharacterized LOC18108584

protein SYM1

uncharacterized LOC7460845

uncharacterized LOC25487391

protein SYM1

uncharacterized LOC107903543

peroxisomal membrane protein 2

uncharacterized LOC107952157

uncharacterized LOC125588745

protein SYM1

uncharacterized BNAC06G05870D

protein SYM1-like

uncharacterized LOC102590255

hypothetical protein

uncharacterized LOC102614505

uncharacterized LOC107799776

uncharacterized LOC107789335

uncharacterized LOC107805063

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04146	Peroxisome	3
tae00480	Glutathione metabolism	2
tae03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04712	Circadian rhythm - plant	3
tae04146	Peroxisome	3
tae00480	Glutathione metabolism	2
tae03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00561	Glycerolipid metabolism	5
tae04146	Peroxisome	3
tae00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00620	Pyruvate metabolism	3
sbi00710	Carbon fixation by Calvin cycle	3
sbi01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03060	Protein export	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01230	Biosynthesis of amino acids	5
sly04141	Protein processing in endoplasmic reticulum	4
sly00290	Valine, leucine and isoleucine biosynthesis	3
sly01210	2-Oxocarboxylic acid metabolism	3
sly00770	Pantothenate and CoA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04146	Peroxisome	2
vvi00260	Glycine, serine and threonine metabolism	2
vvi00630	Glyoxylate and dicarboxylate metabolism	2
vvi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04146	Peroxisome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04146	Peroxisome	4
ppo00380	Tryptophan metabolism	2
ppo00630	Glyoxylate and dicarboxylate metabolism	2
ppo01200	Carbon metabolism	2
ppo04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	2
mtr03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00195	Photosynthesis	5
ghi04146	Peroxisome	2
ghi00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00195	Photosynthesis	5
ghi04146	Peroxisome	2
ghi00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00040	Pentose and glucuronate interconversions	4
cit00195	Photosynthesis	3
cit00051	Fructose and mannose metabolism	2
cit00710	Carbon fixation by Calvin cycle	2
cit01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04146	Peroxisome	2

Expression

Expression pattern

Entrez Gene ID^*

123191135

123042863

123180577

123449048

123426040

100846887

4333336

4346695

100285035

100216568

8064554

827932

841720

106798699

100789384

100786706

101259677

101247444

103858698

103871177

100258564

100253839

18108584

18095627

7460845

25487391

25487620

107903543

107925395

107952157

125588745

106438733

106405987

102595985

102590255

102611604

102614505

107799776

107789335

107805063

5717028

The preparation time of this page was 2.4 [sec].


Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	2	1	2	2	1	2	3	2	2	2	3	2	3	3	2	2	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123191135 (tae-r.2 coexpression data)

Top 50 enrichment test to 123191135 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**