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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123398718   50S ribosomal protein L4-like 
 osa-u.5   4350797   uncharacterized LOC4350797 
 zma-u.5   100280943   50S ribosomal protein L4-like 
 ath-u.5   AT2G20060   Ribosomal protein L4/L1 family 
 gma-u.5   100804238   50S ribosomal protein L4-like 
 gma-u.5   100784680   50S ribosomal protein L4 
 sly-u.5   101261898   uncharacterized LOC101261898 
 vvi-u.5   100265870   uncharacterized LOC100265870 
 ppo-u.5   18097326   uncharacterized LOC18097326 
 mtr-u.5   11437070   50S ribosomal protein L4 

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Top 50 coexpressed genes to 123398718 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123398718 (hvu-r.1 coexpression data)

CoexMap"123398718"


hvuLOC123398718 | Entrez gene ID : 123398718    
Species hvu osa zma ath gma sly vvi ppo mtr bna cit bra ghi sbi bdi nta tae cre sot
Paralog 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG hvg03010 [list] [network] Ribosome (15126 genes)
GO BP
GO:0006412 [list] [network] translation  (594 genes)  IEA  
GO CC
GO:0005840 [list] [network] ribosome  (449 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (445 genes)  IEA  
Protein XP_044949105.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1  (predict for XP_044949105.1)
Subcellular
localization
TargetP
mito 6,  chlo 3  (predict for XP_044949105.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123398718
osa-u.5
for
4350797
zma-u.5
for
100280943
ath-u.5
for
AT2G20060
gma-u.5
for
100804238
gma-u.5
for
100784680
sly-u.5
for
101261898
vvi-u.5
for
100265870
ppo-u.5
for
18097326
mtr-u.5
for
11437070


Ortholog ID: 6806
Species hvu hvu tae tae bdi osa zma sbi sbi ath gma gma sly bra bra vvi ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC123398718 LOC123402234 LOC123143437 LOC123131924 LOC100828027 LOC4350797 LOC100280943 LOC8072011 LOC8061138 AT2G20060 LOC100784680 LOC100804238 LOC101261898 LOC108870453 LOC103842616 LOC100265870 LOC18097326 LOC11437070 LOC107958294 LOC107905905 LOC125576631 LOC106357958 LOC102580579 LOC102614390 LOC107794981 LOC107762007 CHLRE_12g520400v5
Function* 50S ribosomal protein L4-like 50S ribosomal protein L4-like 50S ribosomal protein L4 50S ribosomal protein L4 50S ribosomal protein L4 uncharacterized LOC4350797 50S ribosomal protein L4-like 50S ribosomal protein L4 50S ribosomal protein L4 Ribosomal protein L4/L1 family 50S ribosomal protein L4 50S ribosomal protein L4-like uncharacterized LOC101261898 50S ribosomal protein L4 50S ribosomal protein L4 uncharacterized LOC100265870 uncharacterized LOC18097326 50S ribosomal protein L4 50S ribosomal protein L4 50S ribosomal protein L4 50S ribosomal protein L4-like 50S ribosomal protein L4 50S ribosomal protein L4 uncharacterized LOC102614390 uncharacterized LOC107794981 uncharacterized LOC107762007 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 10
hvu01230 Biosynthesis of amino acids 2
hvu00240 Pyrimidine metabolism 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
hvu03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
tae00230 Purine metabolism 2
tae01232 Nucleotide metabolism 2
tae01240 Biosynthesis of cofactors 2
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 4
zma03018 RNA degradation 4
zma03010 Ribosome 4
zma00970 Aminoacyl-tRNA biosynthesis 2
zma00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
sbi03082 ATP-dependent chromatin remodeling 2
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
sbi03082 ATP-dependent chromatin remodeling 2
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 10
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 10
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 11
ghi03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 11
ghi03018 RNA degradation 4
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 5
cit01230 Biosynthesis of amino acids 4
cit00020 Citrate cycle (TCA cycle) 3
cit01210 2-Oxocarboxylic acid metabolism 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta03008 Ribosome biogenesis in eukaryotes 3
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123398718 123402234 123143437 123131924 100828027 4350797 100280943 8072011 8061138 816525 100784680 100804238 101261898 108870453 103842616 100265870 18097326 11437070 107958294 107905905 125576631 106357958 102580579 102614390 107794981 107762007 66055587
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