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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123401091   splicing factor 3B subunit 1 
 tae-r.2   123136263   splicing factor 3B subunit 1 
 tae-r.2   123143769   splicing factor 3B subunit 1 
 tae-r.2   123110147   splicing factor 3B subunit 1 
 bdi-r.1   100839729   splicing factor 3B subunit 1 
 bdi-r.1   100835688   splicing factor 3B subunit 1 
 osa-u.5   4328284   uncharacterized LOC4328284 
 zma-u.5   103654921   splicing factor 3B subunit 1 
 zma-u.5   100277544   antigenic determinant of rec-A protein, mRNA 
 sbi-r.1   8069963   splicing factor 3B subunit 1 
 ath-u.5   AT5G64270   splicing factor 
 gma-u.5   100810599   splicing factor 3B subunit 1 
 gma-u.5   100785889   splicing factor 3B subunit 1 
 sly-u.5   101252641   uncharacterized LOC101252641 
 bra-r.6   103837520   splicing factor 3B subunit 1 
 bra-r.6   103873845   splicing factor 3B subunit 1 
 vvi-u.5   100243186   uncharacterized LOC100243186 
 ppo-u.5   7461689   uncharacterized LOC7461689 
 ppo-u.5   7461262   uncharacterized LOC7461262 
 mtr-u.5   11424216   splicing factor 3B subunit 1 
 ghi-r.1   107929397   splicing factor 3B subunit 1 
 ghi-r.1   107929017   splicing factor 3B subunit 1 
 bna-r.1   106351917   splicing factor 3B subunit 1-like 
 bna-r.1   111204634   splicing factor 3B subunit 1-like 
 bna-r.1   111197962   splicing factor 3B subunit 1-like 
 sot-r.1   107059135   splicing factor 3B subunit 1-like 
 sot-r.1   102582680   splicing factor 3B subunit 1 
 cit-r.1   102613662   uncharacterized LOC102613662 
 nta-r.1   107769132   uncharacterized LOC107769132 
 cre-r.1   CHLRE_12g494100v5   uncharacterized protein 

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Top 50 coexpressed genes to 123401091 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123401091 (hvu-r.1 coexpression data)

CoexMap"123401091"


hvuLOC123401091 | Entrez gene ID : 123401091    
Species hvu tae bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 2 1 2 1 1 2 1 2 1 2 1 2 3 2 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG hvg03040 [list] [network] Spliceosome (365 genes)
GO BP
GO:0000245 [list] [network] spliceosomal complex assembly  (23 genes)  IEA  
GO CC
GO:0005689 [list] [network] U12-type spliceosomal complex  (19 genes)  IEA  
GO:0071004 [list] [network] U2-type prespliceosome  (23 genes)  IEA  
GO:0005686 [list] [network] U2 snRNP  (24 genes)  IEA  
GO:0071013 [list] [network] catalytic step 2 spliceosome  (70 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (308 genes)  IEA  
Protein XP_044950743.1 [sequence] [blastp]
XP_044950744.1 [sequence] [blastp]
XP_044950745.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 8,  E.R. 1  (predict for XP_044950743.1)
plas 8,  E.R. 1  (predict for XP_044950744.1)
plas 8,  E.R. 1  (predict for XP_044950745.1)
Subcellular
localization
TargetP
other 8  (predict for XP_044950743.1)
other 8  (predict for XP_044950744.1)
other 8  (predict for XP_044950745.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123401091
tae-r.2
for
123136263
tae-r.2
for
123143769
tae-r.2
for
123110147
bdi-r.1
for
100839729
bdi-r.1
for
100835688
osa-u.5
for
4328284
zma-u.5
for
103654921
zma-u.5
for
100277544
sbi-r.1
for
8069963
ath-u.5
for
AT5G64270
gma-u.5
for
100810599
gma-u.5
for
100785889
sly-u.5
for
101252641
bra-r.6
for
103837520
bra-r.6
for
103873845
vvi-u.5
for
100243186
ppo-u.5
for
7461689
ppo-u.5
for
7461262
mtr-u.5
for
11424216
ghi-r.1
for
107929397
ghi-r.1
for
107929017
bna-r.1
for
106351917
bna-r.1
for
111204634
bna-r.1
for
111197962
sot-r.1
for
107059135
sot-r.1
for
102582680
cit-r.1
for
102613662
nta-r.1
for
107769132
cre-r.1
for
CHLRE_12g494100v5


Ortholog ID: 6687
Species hvu tae tae tae bdi bdi osa zma zma sbi ath gma gma sly bra bra vvi ppo ppo mtr ghi ghi bna bna bna sot sot cit nta cre
Symbol LOC123401091 LOC123136263 LOC123110147 LOC123132227 LOC100839729 LOC100835688 LOC4328284 LOC103654921 LOC100277544 LOC8069963 AT5G64270 LOC100810599 LOC100785889 LOC101252641 LOC103837520 LOC103873845 LOC100243186 LOC7461689 LOC7461262 LOC11424216 LOC107929397 LOC107929017 LOC106351917 LOC111204634 LOC111197962 LOC107059135 LOC102582680 LOC102613662 LOC107769132 CHLRE_12g494100v5
Function* splicing factor 3B subunit 1 splicing factor 3B subunit 1 splicing factor 3B subunit 1 splicing factor 3B subunit 1 splicing factor 3B subunit 1 splicing factor 3B subunit 1 uncharacterized LOC4328284 splicing factor 3B subunit 1 antigenic determinant of rec-A protein, mRNA splicing factor 3B subunit 1 splicing factor splicing factor 3B subunit 1 splicing factor 3B subunit 1 uncharacterized LOC101252641 splicing factor 3B subunit 1 splicing factor 3B subunit 1 uncharacterized LOC100243186 uncharacterized LOC7461689 uncharacterized LOC7461262 splicing factor 3B subunit 1 splicing factor 3B subunit 1 splicing factor 3B subunit 1 splicing factor 3B subunit 1-like splicing factor 3B subunit 1-like splicing factor 3B subunit 1-like splicing factor 3B subunit 1-like splicing factor 3B subunit 1 uncharacterized LOC102613662 uncharacterized LOC107769132 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 6
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03420 Nucleotide excision repair 2
ath04120 Ubiquitin mediated proteolysis 2
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 9
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 5
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo04712 Circadian rhythm - plant 2
ppo03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
mtr00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi00270 Cysteine and methionine metabolism 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 5
ghi00270 Cysteine and methionine metabolism 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna00562 Inositol phosphate metabolism 2
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 7
nta00480 Glutathione metabolism 2
nta03013 Nucleocytoplasmic transport 2
nta03030 DNA replication 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 8
cre03020 RNA polymerase 3
cre03420 Nucleotide excision repair 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123401091 123136263 123110147 123132227 100839729 100835688 4328284 103654921 100277544 8069963 836548 100810599 100785889 101252641 103837520 103873845 100243186 7461689 7461262 11424216 107929397 107929017 106351917 111204634 111197962 107059135 102582680 102613662 107769132 5726113
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