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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8069963   splicing factor 3B subunit 1 
 zma-u.5   103654921   splicing factor 3B subunit 1 
 zma-u.5   100277544   antigenic determinant of rec-A protein, mRNA 
 osa-u.5   4328284   uncharacterized LOC4328284 
 ath-u.5   AT5G64270   splicing factor 
 gma-u.5   100810599   splicing factor 3B subunit 1 
 gma-u.5   100785889   splicing factor 3B subunit 1 
 sly-u.5   101252641   uncharacterized LOC101252641 
 vvi-u.5   100243186   uncharacterized LOC100243186 
 ppo-u.5   7461262   uncharacterized LOC7461262 
 ppo-u.5   7461689   uncharacterized LOC7461689 
 mtr-u.5   11424216   splicing factor 3B subunit 1 

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Top 50 coexpressed genes to 8069963 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8069963 (sbi-r.1 coexpression data)

CoexMap"8069963"


sbiLOC8069963 | Entrez gene ID : 8069963      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 2 1 1 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03040 [list] [network] Spliceosome (208 genes)
GO BP
GO:0000245 [list] [network] spliceosomal complex assembly  (17 genes)  IEA  
GO CC
GO:0005689 [list] [network] U12-type spliceosomal complex  (18 genes)  IEA  
GO:0071004 [list] [network] U2-type prespliceosome  (20 genes)  IEA  
GO:0005686 [list] [network] U2 snRNP  (25 genes)  IEA  
GO:0071013 [list] [network] catalytic step 2 spliceosome  (61 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (267 genes)  IEA  
Protein XP_002451534.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 8,  E.R. 1  (predict for XP_002451534.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002451534.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8069963

.
zma-u.5
for
103654921

.
zma-u.5
for
100277544

.
osa-u.5
for
4328284

.
ath-u.5
for
AT5G64270

.
gma-u.5
for
100810599

.
gma-u.5
for
100785889

.
sly-u.5
for
101252641

.
vvi-u.5
for
100243186

.
ppo-u.5
for
7461262

.
ppo-u.5
for
7461689

.
mtr-u.5
for
11424216

.


Ortholog ID: 6687
Species ath gma gma sly osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi bdi nta
Symbol AT5G64270 LOC100810599 LOC100785889 LOC101252641 LOC4328284 LOC103654921 LOC100277544 LOC103873845 LOC103837520 LOC100243186 LOC7461689 LOC7461262 LOC11424216 LOC123110147 LOC123136263 LOC123401091 LOC107929397 LOC107929017 LOC111197962 LOC111204634 CHLRE_12g494100v5 LOC8069963 LOC102582680 LOC107059135 LOC102613662 LOC100839729 LOC100835688 LOC107769132
Function* splicing factor splicing factor 3B subunit 1 splicing factor 3B subunit 1 uncharacterized LOC101252641 uncharacterized LOC4328284 splicing factor 3B subunit 1 antigenic determinant of rec-A protein, mRNA splicing factor 3B subunit 1 splicing factor 3B subunit 1 uncharacterized LOC100243186 uncharacterized LOC7461689 uncharacterized LOC7461262 splicing factor 3B subunit 1 splicing factor 3B subunit 1 splicing factor 3B subunit 1 splicing factor 3B subunit 1 splicing factor 3B subunit 1 splicing factor 3B subunit 1 splicing factor 3B subunit 1-like splicing factor 3B subunit 1-like uncharacterized protein splicing factor 3B subunit 1 splicing factor 3B subunit 1 splicing factor 3B subunit 1-like uncharacterized LOC102613662 splicing factor 3B subunit 1 splicing factor 3B subunit 1 uncharacterized LOC107769132
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03420 Nucleotide excision repair 2
ath04120 Ubiquitin mediated proteolysis 2
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 9
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 6
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 5
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo04712 Circadian rhythm - plant 2
ppo03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
mtr00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi00270 Cysteine and methionine metabolism 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 5
ghi00270 Cysteine and methionine metabolism 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna00562 Inositol phosphate metabolism 2
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 8
cre03020 RNA polymerase 3
cre03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 7
nta00480 Glutathione metabolism 2
nta03013 Nucleocytoplasmic transport 2
nta03030 DNA replication 2
nta03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836548 100810599 100785889 101252641 4328284 103654921 100277544 103873845 103837520 100243186 7461689 7461262 11424216 123110147 123136263 123401091 107929397 107929017 111197962 111204634 5726113 8069963 102582680 107059135 102613662 100839729 100835688 107769132
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