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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123402879   DNA repair and recombination protein RAD54 
 tae-r.2   123138366   DNA repair and recombination protein RAD54 
 tae-r.2   123128487   DNA repair and recombination protein RAD54 
 tae-r.2   123145612   DNA repair and recombination protein RAD54 
 bdi-r.1   100831864   DNA repair and recombination protein RAD54 
 osa-u.5   4330819   DNA repair and recombination protein RAD54-like 
 zma-u.5   103627774   DNA repair and recombination protein RAD54 
 sbi-r.1   8078914   DNA repair and recombination protein RAD54 
 ath-u.5   RAD54   DNA repair/recombination protein 
 gma-u.5   100781631   protein CHROMATIN REMODELING 25 
 sly-u.5   101255388   protein CHROMATIN REMODELING 25 
 bra-r.6   103869485   protein CHROMATIN REMODELING 25 
 vvi-u.5   100246859   protein CHROMATIN REMODELING 25 
 ppo-u.5   18097791   protein CHROMATIN REMODELING 25 
 mtr-u.5   25494466   protein CHROMATIN REMODELING 25 
 ghi-r.1   107894254   protein CHROMATIN REMODELING 25 
 ghi-r.1   121225640   protein CHROMATIN REMODELING 25 
 bna-r.1   111203880   protein CHROMATIN REMODELING 25 
 bna-r.1   106451901   protein CHROMATIN REMODELING 25 
 bna-r.1   106453924   protein CHROMATIN REMODELING 25-like 
 sot-r.1   102580628   protein CHROMATIN REMODELING 25 
 cit-r.1   102614093   protein CHROMATIN REMODELING 25 
 nta-r.1   107822142   protein CHROMATIN REMODELING 25-like 
 nta-r.1   107823820   protein CHROMATIN REMODELING 25 
 cre-r.1   CHLRE_10g430950v5   uncharacterized protein 

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Top 50 coexpressed genes to 123402879 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123402879 (hvu-r.1 coexpression data)

CoexMap"123402879"


hvuLOC123402879 | Entrez gene ID : 123402879    
Species hvu tae bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 1 1 1 1 1 1 1 1 1 2 3 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG hvg03440 [list] [network] Homologous recombination (64 genes)
GO BP
GO:0045003 [list] [network] double-strand break repair via synthesis-dependent strand annealing  (6 genes)  IEA  
GO:0007131 [list] [network] reciprocal meiotic recombination  (40 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3241 genes)  IEA  
GO MF
GO:0015616 [list] [network] DNA translocase activity  (4 genes)  IEA  
GO:0140658 [list] [network] ATP-dependent chromatin remodeler activity  (49 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2546 genes)  IEA  
Protein XP_044952775.1 [sequence] [blastp]
XP_044952776.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cysk 2,  plas 1,  golg_plas 1  (predict for XP_044952775.1)
nucl 6,  cysk 2,  plas 1,  golg_plas 1  (predict for XP_044952776.1)
Subcellular
localization
TargetP
other 8  (predict for XP_044952775.1)
other 8  (predict for XP_044952776.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123402879
tae-r.2
for
123138366
tae-r.2
for
123128487
tae-r.2
for
123145612
bdi-r.1
for
100831864
osa-u.5
for
4330819
zma-u.5
for
103627774
sbi-r.1
for
8078914
ath-u.5
for
RAD54
gma-u.5
for
100781631
sly-u.5
for
101255388
bra-r.6
for
103869485
vvi-u.5
for
100246859
ppo-u.5
for
18097791
mtr-u.5
for
25494466
ghi-r.1
for
107894254
ghi-r.1
for
121225640
bna-r.1
for
111203880
bna-r.1
for
106451901
bna-r.1
for
106453924
sot-r.1
for
102580628
cit-r.1
for
102614093
nta-r.1
for
107822142
nta-r.1
for
107823820
cre-r.1
for
CHLRE_10g430950v5


Ortholog ID: 10096
Species hvu tae tae tae bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi ghi bna bna bna sot cit nta nta cre
Symbol LOC123402879 LOC123138366 LOC123128487 LOC123145612 LOC100831864 LOC4330819 LOC103627774 LOC8078914 RAD54 LOC100781631 LOC101255388 LOC103869485 LOC100246859 LOC18097791 LOC25494466 LOC107894254 LOC121225640 LOC111203880 LOC106451901 LOC106453924 LOC102580628 LOC102614093 LOC107822142 LOC107823820 CHLRE_10g430950v5
Function* DNA repair and recombination protein RAD54 DNA repair and recombination protein RAD54 DNA repair and recombination protein RAD54 DNA repair and recombination protein RAD54 DNA repair and recombination protein RAD54 DNA repair and recombination protein RAD54-like DNA repair and recombination protein RAD54 DNA repair and recombination protein RAD54 DNA repair/recombination protein protein CHROMATIN REMODELING 25 protein CHROMATIN REMODELING 25 protein CHROMATIN REMODELING 25 protein CHROMATIN REMODELING 25 protein CHROMATIN REMODELING 25 protein CHROMATIN REMODELING 25 protein CHROMATIN REMODELING 25 protein CHROMATIN REMODELING 25 protein CHROMATIN REMODELING 25 protein CHROMATIN REMODELING 25 protein CHROMATIN REMODELING 25-like protein CHROMATIN REMODELING 25 protein CHROMATIN REMODELING 25 protein CHROMATIN REMODELING 25-like protein CHROMATIN REMODELING 25 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 5
tae03440 Homologous recombination 4
tae04814 Motor proteins 4
tae03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03013 Nucleocytoplasmic transport 4
tae03440 Homologous recombination 3
tae04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 5
tae03013 Nucleocytoplasmic transport 4
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 5
bdi04814 Motor proteins 3
bdi03410 Base excision repair 2
bdi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 2
zma03030 DNA replication 2
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 7
ath03460 Fanconi anemia pathway 4
ath03030 DNA replication 2
ath03420 Nucleotide excision repair 2
ath03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03440 Homologous recombination 2
gma03460 Fanconi anemia pathway 2
gma03030 DNA replication 2
gma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03440 Homologous recombination 3
sly04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04814 Motor proteins 4
bra03460 Fanconi anemia pathway 2
bra03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 4
vvi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 6
ghi03460 Fanconi anemia pathway 2
ghi03440 Homologous recombination 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 6
ghi03460 Fanconi anemia pathway 2
ghi03440 Homologous recombination 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03430 Mismatch repair 3
sot03440 Homologous recombination 2
sot03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta03440 Homologous recombination 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 4
nta03460 Fanconi anemia pathway 2
nta03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123402879 123138366 123128487 123145612 100831864 4330819 103627774 8078914 821455 100781631 101255388 103869485 100246859 18097791 25494466 107894254 121225640 111203880 106451901 106453924 102580628 102614093 107822142 107823820 5728084
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