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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123404533   pentatricopeptide repeat-containing protein At2g01860 
 osa-u.5   4328094   pentatricopeptide repeat-containing protein At2g01860 
 zma-u.5   100381697   pentatricopeptide repeat protein PPR566-6 
 ath-u.5   EMB975   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100816513   pentatricopeptide repeat-containing protein At2g01860 
 gma-u.5   100775477   pentatricopeptide repeat-containing protein At2g01860 
 sly-u.5   101257629   pentatricopeptide repeat-containing protein At2g01860 
 vvi-u.5   100266830   pentatricopeptide repeat-containing protein At2g01860 
 ppo-u.5   7485642   pentatricopeptide repeat-containing protein At2g01860 
 mtr-u.5   25493019   pentatricopeptide repeat-containing protein At2g01860 

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Top 50 coexpressed genes to 123404533 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123404533 (hvu-r.1 coexpression data)

CoexMap"123404533"


hvuLOC123404533 | Entrez gene ID : 123404533    
Species hvu osa zma ath gma sly vvi ppo mtr bdi bra cit bna sbi ghi sot nta cre tae
Paralog 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4692 genes)  IEA  
Protein XP_044954392.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 2,  extr 2,  chlo_mito 2  (predict for XP_044954392.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_044954392.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123404533
osa-u.5
for
4328094
zma-u.5
for
100381697
ath-u.5
for
EMB975
gma-u.5
for
100816513
gma-u.5
for
100775477
sly-u.5
for
101257629
vvi-u.5
for
100266830
ppo-u.5
for
7485642
mtr-u.5
for
25493019


Ortholog ID: 7911
Species hvu tae tae osa zma sbi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta
Symbol LOC123404533 LOC123143262 LOC123131803 LOC4328094 LOC100381697 LOC8062832 EMB975 LOC100775477 LOC100816513 LOC101257629 LOC103827546 LOC100266830 LOC7485642 LOC25493019 LOC107932475 LOC121227592 LOC106411511 LOC106411513 LOC102596786 LOC102619687 LOC107768654 LOC107779313
Function* pentatricopeptide repeat-containing protein At2g01860 pentatricopeptide repeat-containing protein At2g01860 pentatricopeptide repeat-containing protein At2g01860 pentatricopeptide repeat-containing protein At2g01860 pentatricopeptide repeat protein PPR566-6 pentatricopeptide repeat-containing protein At2g01860 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At2g01860 pentatricopeptide repeat-containing protein At2g01860 pentatricopeptide repeat-containing protein At2g01860 pentatricopeptide repeat-containing protein At2g01860 pentatricopeptide repeat-containing protein At2g01860 pentatricopeptide repeat-containing protein At2g01860 pentatricopeptide repeat-containing protein At2g01860 pentatricopeptide repeat-containing protein At2g01860 pentatricopeptide repeat-containing protein At2g01860-like pentatricopeptide repeat-containing protein At2g01860-like pentatricopeptide repeat-containing protein At2g01860-like pentatricopeptide repeat-containing protein At2g01860 pentatricopeptide repeat-containing protein At2g01860 pentatricopeptide repeat-containing protein At2g01860-like pentatricopeptide repeat-containing protein At2g01860-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 3
tae00240 Pyrimidine metabolism 2
tae01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 4
tae00053 Ascorbate and aldarate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00280 Valine, leucine and isoleucine degradation 2
gma00410 beta-Alanine metabolism 2
gma00640 Propanoate metabolism 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 2
mtr00561 Glycerolipid metabolism 2
mtr00566 Sulfoquinovose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00052 Galactose metabolism 4
bna00520 Amino sugar and nucleotide sugar metabolism 4
bna01250 Biosynthesis of nucleotide sugars 4
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00052 Galactose metabolism 4
bna00520 Amino sugar and nucleotide sugar metabolism 4
bna01250 Biosynthesis of nucleotide sugars 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123404533 123143262 123131803 4328094 100381697 8062832 814717 100775477 100816513 101257629 103827546 100266830 7485642 25493019 107932475 121227592 106411511 106411513 102596786 102619687 107768654 107779313
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