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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8062832   pentatricopeptide repeat-containing protein At2g01860 
 zma-u.5   100381697   pentatricopeptide repeat protein PPR566-6 
 osa-u.5   4328094   pentatricopeptide repeat-containing protein At2g01860 
 ath-u.5   EMB975   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100816513   pentatricopeptide repeat-containing protein At2g01860 
 gma-u.5   100775477   pentatricopeptide repeat-containing protein At2g01860 
 sly-u.5   101257629   pentatricopeptide repeat-containing protein At2g01860 
 vvi-u.5   100266830   pentatricopeptide repeat-containing protein At2g01860 
 ppo-u.5   7485642   pentatricopeptide repeat-containing protein At2g01860 
 mtr-u.5   25493019   pentatricopeptide repeat-containing protein At2g01860 

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Top 50 coexpressed genes to 8062832 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8062832 (sbi-r.1 coexpression data)

CoexMap"8062832"


sbiLOC8062832 | Entrez gene ID : 8062832    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002464983.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1,  extr 1  (predict for XP_002464983.2)
Subcellular
localization
TargetP
scret 3,  chlo 3  (predict for XP_002464983.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8062832

.
zma-u.5
for
100381697

.
osa-u.5
for
4328094

.
ath-u.5
for
EMB975

.
gma-u.5
for
100816513

.
gma-u.5
for
100775477

.
sly-u.5
for
101257629

.
vvi-u.5
for
100266830

.
ppo-u.5
for
7485642

.
mtr-u.5
for
25493019

.


Ortholog ID: 7911
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit nta nta
Symbol EMB975 LOC100775477 LOC100816513 LOC101257629 LOC4328094 LOC100381697 LOC103827546 LOC100266830 LOC7485642 LOC25493019 LOC123143262 LOC123131803 LOC123404533 LOC107932475 LOC121227592 LOC106411511 LOC106411513 LOC8062832 LOC102596786 LOC102619687 LOC107768654 LOC107779313
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At2g01860 pentatricopeptide repeat-containing protein At2g01860 pentatricopeptide repeat-containing protein At2g01860 pentatricopeptide repeat-containing protein At2g01860 pentatricopeptide repeat protein PPR566-6 pentatricopeptide repeat-containing protein At2g01860 pentatricopeptide repeat-containing protein At2g01860 pentatricopeptide repeat-containing protein At2g01860 pentatricopeptide repeat-containing protein At2g01860 pentatricopeptide repeat-containing protein At2g01860 pentatricopeptide repeat-containing protein At2g01860 pentatricopeptide repeat-containing protein At2g01860 pentatricopeptide repeat-containing protein At2g01860 pentatricopeptide repeat-containing protein At2g01860-like pentatricopeptide repeat-containing protein At2g01860-like pentatricopeptide repeat-containing protein At2g01860-like pentatricopeptide repeat-containing protein At2g01860 pentatricopeptide repeat-containing protein At2g01860 pentatricopeptide repeat-containing protein At2g01860 pentatricopeptide repeat-containing protein At2g01860-like pentatricopeptide repeat-containing protein At2g01860-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00280 Valine, leucine and isoleucine degradation 2
gma00410 beta-Alanine metabolism 2
gma00640 Propanoate metabolism 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 2
mtr00561 Glycerolipid metabolism 2
mtr00566 Sulfoquinovose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 3
tae00240 Pyrimidine metabolism 2
tae01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 4
tae00053 Ascorbate and aldarate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00052 Galactose metabolism 4
bna00520 Amino sugar and nucleotide sugar metabolism 4
bna01250 Biosynthesis of nucleotide sugars 4
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00052 Galactose metabolism 4
bna00520 Amino sugar and nucleotide sugar metabolism 4
bna01250 Biosynthesis of nucleotide sugars 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03083 Polycomb repressive complex 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 814717 100775477 100816513 101257629 4328094 100381697 103827546 100266830 7485642 25493019 123143262 123131803 123404533 107932475 121227592 106411511 106411513 8062832 102596786 102619687 107768654 107779313
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