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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4347892   uncharacterized LOC4347892 
 osa-u.5   4338782   uncharacterized LOC4338782 
 zma-u.5   100282422   nucleic acid binding protein 
 zma-u.5   103627088   R3H domain-containing protein 1-like 
 zma-u.5   103647263   Single-stranded nucleic acid binding R3H protein 
 ath-u.5   AT2G40960   Single-stranded nucleic acid binding R3H protein 
 ath-u.5   AT3G10770   Single-stranded nucleic acid binding R3H protein 
 ath-u.5   AT3G56680   Single-stranded nucleic acid binding R3H protein 
 gma-u.5   100814835   R3H and SUZ domain-containing protein 
 gma-u.5   100799336   uncharacterized LOC100799336 
 gma-u.5   100796710   R3H domain-containing protein 2 
 sly-u.5   101245604   uncharacterized LOC101245604 
 sly-u.5   101264077   uncharacterized LOC101264077 
 vvi-u.5   100255059   uncharacterized LOC100255059 
 vvi-u.5   100251643   uncharacterized LOC100251643 
 ppo-u.5   7479653   uncharacterized LOC7479653 
 ppo-u.5   7464072   uncharacterized LOC7464072 
 ppo-u.5   7486913   uncharacterized LOC7486913 
 mtr-u.5   11422947   cAMP-regulated phosphoprotein 21 
 mtr-u.5   11415193   R3H domain-containing protein 2 
 mtr-u.5   11422184   uncharacterized LOC11422184 

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Top 50 coexpressed genes to 4347892 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4347892 (osa-u.5 coexpression data)

CoexMap"123405380"


hvuLOC123405380 | Entrez gene ID : 123405380    
Species osa zma ath gma sly vvi ppo mtr tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 2 3 3 3 2 2 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0046983 [list] [network] protein dimerization activity  (590 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (3739 genes)  IEA  
Protein XP_044955018.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 3,  nucl_plas 3  (predict for XP_044955018.1)
Subcellular
localization
TargetP
other 9  (predict for XP_044955018.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4347892

.
osa-u.5
for
4338782

.
zma-u.5
for
100282422

.
zma-u.5
for
103627088

.
zma-u.5
for
103647263

.
ath-u.5
for
AT2G40960

.
ath-u.5
for
AT3G10770

.
ath-u.5
for
AT3G56680

.
gma-u.5
for
100814835

.
gma-u.5
for
100799336

.
gma-u.5
for
100796710

.
sly-u.5
for
101245604

.
sly-u.5
for
101264077

.
vvi-u.5
for
100255059

.
vvi-u.5
for
100251643

.
ppo-u.5
for
7479653

.
ppo-u.5
for
7464072

.
ppo-u.5
for
7486913

.
mtr-u.5
for
11422947

.
mtr-u.5
for
11415193

.
mtr-u.5
for
11422184

.


Ortholog ID: 1846
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT3G56680 AT2G40960 LOC100796710 LOC100797761 LOC101245604 LOC101264077 LOC4338782 LOC4347892 LOC103647263 LOC100282422 LOC103863092 LOC103847318 LOC100255059 LOC100251643 LOC7479653 LOC7464072 LOC11415193 LOC11422947 LOC123095587 LOC123090525 LOC123446856 LOC107925870 LOC121209482 LOC106434592 LOC106381175 CHLRE_01g068742v5 LOC110430213 LOC110433016 LOC102600752 LOC102580050 LOC102629684 LOC102619616 LOC100822579 LOC100835943 LOC107817225 LOC107805498
Function* Single-stranded nucleic acid binding R3H protein Single-stranded nucleic acid binding R3H protein R3H domain-containing protein 2 R3H domain-containing protein 1 uncharacterized LOC101245604 uncharacterized LOC101264077 uncharacterized LOC4338782 uncharacterized LOC4347892 Single-stranded nucleic acid binding R3H protein nucleic acid binding protein protein encore uncharacterized LOC103847318 uncharacterized LOC100255059 uncharacterized LOC100251643 uncharacterized LOC7479653 uncharacterized LOC7464072 R3H domain-containing protein 2 cAMP-regulated phosphoprotein 21 60S ribosomal protein L10a R3H domain-containing protein 2 R3H domain-containing protein 2-like uncharacterized LOC107925870 uncharacterized LOC121209482 uncharacterized LOC106434592 R3H domain-containing protein 1-like uncharacterized protein uncharacterized LOC110430213 R3H domain-containing protein 1-like R3H domain-containing protein 2-like R3H domain-containing protein 2 uncharacterized LOC102629684 uncharacterized LOC102619616 R3H domain-containing protein 2 uncharacterized LOC100835943 uncharacterized LOC107817225 uncharacterized LOC107805498
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 5
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 3
osa04144 Endocytosis 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 3
zma04712 Circadian rhythm - plant 2
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
zma04141 Protein processing in endoplasmic reticulum 3
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 2
vvi03013 Nucleocytoplasmic transport 2
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 3
tae00330 Arginine and proline metabolism 3
tae00410 beta-Alanine metabolism 3
tae00770 Pantothenate and CoA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 3
hvu04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
sot04141 Protein processing in endoplasmic reticulum 3
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03420 Nucleotide excision repair 2
cit04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 2
nta04141 Protein processing in endoplasmic reticulum 2
nta03015 mRNA surveillance pathway 2
nta04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 3
nta04712 Circadian rhythm - plant 2
nta03015 mRNA surveillance pathway 2
nta04382 Cornified envelope formation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824835 818696 100796710 100797761 101245604 101264077 4338782 4347892 103647263 100282422 103863092 103847318 100255059 100251643 7479653 7464072 11415193 11422947 123095587 123090525 123446856 107925870 121209482 106434592 106381175 5725757 110430213 110433016 102600752 102580050 102629684 102619616 100822579 100835943 107817225 107805498
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