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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1  123406970  pentatricopeptide repeat-containing protein At1g03540 
 osa-u.5  4341512  pentatricopeptide repeat-containing protein At1g03540 
 zma-u.5  103626319  pentatricopeptide repeat-containing protein 
 ath-u.5  AT1G03540  Pentatricopeptide repeat (PPR-like) superfamily protein 
 gma-u.5  100795078  pentatricopeptide repeat-containing protein At1g03540 
 sly-u.5  101257609  pentatricopeptide repeat-containing protein At1g03540 
 vvi-u.5  100267038  pentatricopeptide repeat-containing protein At1g03540 
 mtr-u.5  25486714  pentatricopeptide repeat-containing protein At1g03540 

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Top 50 coexpressed genes to 123406970 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123406970 (hvu-r.1 coexpression data)

CoexMap"123406970"


hvuLOC123406970 | Entrez gene ID : 123406970
Species hvu osa zma ath gma sly vvi mtr bdi bra cit bna ppo sbi ghi sot nta cre tae
Paralog 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (393 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1359 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4692 genes)  IEA  
Protein XP_044955924.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 2,  nucl 1,  mito 1  (predict for XP_044955924.1)
Subcellular
localization
TargetP
other 5  (predict for XP_044955924.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

hvu-r.1
for
123406970


osa-u.5
for
4341512


zma-u.5
for
103626319


ath-u.5
for
AT1G03540


gma-u.5
for
100795078


sly-u.5
for
101257609


vvi-u.5
for
100267038


mtr-u.5
for
25486714



Ortholog ID: 11064
Species hvu bdi osa zma sbi sbi ath gma sly bra vvi mtr ghi ghi sot cit nta nta
Symbol LOC123406970 LOC100826922 LOC4341512 LOC103626319 LOC8082280 LOC8061627 AT1G03540 LOC100795078 LOC101257609 LOC103836612 LOC100267038 LOC25486714 LOC107909259 LOC107886751 LOC102593122 LOC102611639 LOC107799642 LOC107789796
Function* pentatricopeptide repeat-containing protein At1g03540 pentatricopeptide repeat-containing protein At1g03540 pentatricopeptide repeat-containing protein At1g03540 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At1g03540 pentatricopeptide repeat-containing protein At1g03540 Pentatricopeptide repeat (PPR-like) superfamily protein pentatricopeptide repeat-containing protein At1g03540 pentatricopeptide repeat-containing protein At1g03540 pentatricopeptide repeat-containing protein At1g03540 pentatricopeptide repeat-containing protein At1g03540 pentatricopeptide repeat-containing protein At1g03540 pentatricopeptide repeat-containing protein At1g03540 pentatricopeptide repeat-containing protein At1g03540 pentatricopeptide repeat-containing protein At1g03540 pentatricopeptide repeat-containing protein At1g03540 pentatricopeptide repeat-containing protein At1g03540-like pentatricopeptide repeat-containing protein At1g03540-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123406970 100826922 4341512 103626319 8082280 8061627 839466 100795078 101257609 103836612 100267038 25486714 107909259 107886751 102593122 102611639 107799642 107789796
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