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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123411554   E3 ubiquitin-protein ligase RING1-like 
 hvu-r.1   123426868   RING-H2 finger protein ATL52-like 
 tae-r.2   123185533   RING-H2 finger protein ATL52 
 bdi-r.1   100836409   RING-H2 finger protein ATL52 
 osa-u.5   4335997   RING-H2 finger protein ATL51 
 osa-u.5   9267130   E3 ubiquitin-protein ligase Os04g0590900-like 
 zma-u.5   103653664   RING-H2 finger protein ATL5 
 zma-u.5   100272434   putative RING zinc finger domain superfamily protein 
 sbi-r.1   8072614   E3 ubiquitin-protein ligase RING1 
 sbi-r.1   8073398   RING-H2 finger protein ATL51 
 ath-u.5   AT4G33565   RING/U-box superfamily protein 
 ath-u.5   RING1   RING/U-box superfamily protein 
 ath-u.5   AT1G72220   RING/U-box superfamily protein 
 gma-u.5   100813311   RING-H2 finger protein ATL54 
 gma-u.5   100781245   RING-H2 finger protein ATL54 
 sly-u.5   104646781   RING-H2 finger protein ATL54-like 
 sly-u.5   101247705   RING-H2 finger protein ATL54 
 sly-u.5   101264281   RING-H2 finger protein ATL52 
 bra-r.6   103852763   RING-H2 finger protein ATL54 
 bra-r.6   103847555   E3 ubiquitin-protein ligase RING1 
 bra-r.6   103834472   RING-H2 finger protein ATL54 
 vvi-u.5   100854240   RING-H2 finger protein ATL54 
 vvi-u.5   100854068   RING-H2 finger protein ATL54 
 vvi-u.5   100257251   RING-H2 finger protein ATL54 
 ppo-u.5   7461803   RING-H2 finger protein ATL54 
 ppo-u.5   7461256   E3 ubiquitin-protein ligase RING1 
 ppo-u.5   7466783   E3 ubiquitin-protein ligase RING1 
 mtr-u.5   11433251   RING-H2 finger protein ATL54 
 mtr-u.5   11434338   RING-H2 finger protein ATL54 
 mtr-u.5   25501862   E3 ubiquitin-protein ligase RING1 
 ghi-r.1   121210810   RING-H2 finger protein ATL54 
 ghi-r.1   107928616   RING-H2 finger protein ATL54 
 ghi-r.1   107920286   RING-H2 finger protein ATL54 
 bna-r.1   106416763   RING-H2 finger protein ATL54 
 bna-r.1   106402424   RING-H2 finger protein ATL54 
 sot-r.1   102597750   RING-H2 finger protein ATL54-like 
 sot-r.1   102593196   RING-H2 finger protein ATL54 
 sot-r.1   102589761   E3 ubiquitin-protein ligase RING1-like 
 cit-r.1   102614612   RING-H2 finger protein ATL54-like 
 cit-r.1   102617929   RING-H2 finger protein ATL54-like 
 cit-r.1   102627101   RING-H2 finger protein ATL52-like 
 nta-r.1   107803856   RING-H2 finger protein ATL54-like 
 nta-r.1   107770923   RING-H2 finger protein ATL54 
 nta-r.1   107806152   RING-H2 finger protein ATL54-like 

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Top 50 coexpressed genes to 123411554 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123411554 (hvu-r.1 coexpression data)

CoexMap"123411554"


hvuLOC123411554 | Entrez gene ID : 123411554    
Species hvu tae bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 1 1 2 2 2 3 2 3 3 3 3 3 3 2 3 3 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (478 genes)  IEA  
GO CC
GO MF
Protein XP_044960454.1 [sequence] [blastp]
Subcellular
localization
wolf
E.R. 4,  chlo 1,  plas 1,  vacu 1,  nucl 1,  mito 1,  golg_plas 1,  cysk_plas 1,  cyto_plas 1  (predict for XP_044960454.1)
Subcellular
localization
TargetP
other 8,  chlo 6  (predict for XP_044960454.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123411554
hvu-r.1
for
123426868
tae-r.2
for
123185533
bdi-r.1
for
100836409
osa-u.5
for
4335997
osa-u.5
for
9267130
zma-u.5
for
103653664
zma-u.5
for
100272434
sbi-r.1
for
8072614
sbi-r.1
for
8073398
ath-u.5
for
AT4G33565
ath-u.5
for
RING1
ath-u.5
for
AT1G72220
gma-u.5
for
100813311
gma-u.5
for
100781245
sly-u.5
for
104646781
sly-u.5
for
101247705
sly-u.5
for
101264281
bra-r.6
for
103852763
bra-r.6
for
103847555
bra-r.6
for
103834472
vvi-u.5
for
100854240
vvi-u.5
for
100854068
vvi-u.5
for
100257251
ppo-u.5
for
7461803
ppo-u.5
for
7461256
ppo-u.5
for
7466783
mtr-u.5
for
11433251
mtr-u.5
for
11434338
mtr-u.5
for
25501862
ghi-r.1
for
121210810
ghi-r.1
for
107928616
ghi-r.1
for
107920286
bna-r.1
for
106416763
bna-r.1
for
106402424
sot-r.1
for
102597750
sot-r.1
for
102593196
sot-r.1
for
102589761
cit-r.1
for
102614612
cit-r.1
for
102617929
cit-r.1
for
102627101
nta-r.1
for
107803856
nta-r.1
for
107770923
nta-r.1
for
107806152


Ortholog ID: 1245
Species hvu hvu tae bdi osa osa zma zma sbi sbi ath ath ath gma gma sly sly sly bra bra vvi vvi vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna sot sot sot cit cit cit nta nta nta
Symbol LOC123411554 LOC123426868 LOC123185533 LOC100836409 LOC4335997 LOC9267130 LOC103653664 LOC100272434 LOC8072614 LOC8073398 AT4G33565 RING1 AT1G72220 LOC100801551 LOC100819010 LOC104646781 LOC101264281 LOC101268519 LOC103847555 LOC103834472 LOC100854240 LOC100854068 LOC100257251 LOC7461256 LOC7466783 LOC7486081 LOC11433251 LOC11434338 LOC11411830 LOC107928616 LOC107905079 LOC107949145 LOC106402424 LOC106365027 LOC102597750 LOC102589761 LOC107061636 LOC102614612 LOC102617929 LOC102627101 LOC107770923 LOC107812361 LOC107805445
Function* E3 ubiquitin-protein ligase RING1-like RING-H2 finger protein ATL52-like RING-H2 finger protein ATL52 RING-H2 finger protein ATL52 RING-H2 finger protein ATL51 E3 ubiquitin-protein ligase Os04g0590900-like RING-H2 finger protein ATL5 putative RING zinc finger domain superfamily protein E3 ubiquitin-protein ligase RING1 RING-H2 finger protein ATL51 RING/U-box superfamily protein RING/U-box superfamily protein RING/U-box superfamily protein RING-H2 finger protein ATL54-like RING-H2 finger protein ATL54 RING-H2 finger protein ATL54-like RING-H2 finger protein ATL52 RING-H2 finger protein ATL54-like E3 ubiquitin-protein ligase RING1 RING-H2 finger protein ATL54 RING-H2 finger protein ATL54 RING-H2 finger protein ATL54 RING-H2 finger protein ATL54 E3 ubiquitin-protein ligase RING1 E3 ubiquitin-protein ligase RING1 RING-H2 finger protein ATL54 RING-H2 finger protein ATL54 RING-H2 finger protein ATL54 RING-H2 finger protein ATL54 RING-H2 finger protein ATL54 RING-H2 finger protein ATL54 E3 ubiquitin-protein ligase RING1 RING-H2 finger protein ATL54 RING-H2 finger protein ATL54-like RING-H2 finger protein ATL54-like E3 ubiquitin-protein ligase RING1-like putative RING-H2 finger protein ATL53 RING-H2 finger protein ATL54-like RING-H2 finger protein ATL54-like RING-H2 finger protein ATL52-like RING-H2 finger protein ATL54 uncharacterized LOC107812361 RING-H2 finger protein ATL54-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
tae01230 Biosynthesis of amino acids 5
tae04016 MAPK signaling pathway - plant 3
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 5
gma04016 MAPK signaling pathway - plant 3
gma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00940 Phenylpropanoid biosynthesis 6
vvi00941 Flavonoid biosynthesis 4
vvi00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 4
vvi04016 MAPK signaling pathway - plant 2
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04130 SNARE interactions in vesicular transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03250 Viral life cycle - HIV-1 2
ghi03272 Virion - Hepatitis viruses 2
ghi04144 Endocytosis 2
ghi00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00592 alpha-Linolenic acid metabolism 6
ghi04075 Plant hormone signal transduction 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00600 Sphingolipid metabolism 2
bna04142 Lysosome 2
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot02010 ABC transporters 2
sot00620 Pyruvate metabolism 2
sot00710 Carbon fixation by Calvin cycle 2
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 4
sot00941 Flavonoid biosynthesis 3
sot00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 3
sot00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00480 Glutathione metabolism 4
cit02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00020 Citrate cycle (TCA cycle) 2
nta00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123411554 123426868 123185533 100836409 4335997 9267130 103653664 100272434 8072614 8073398 829496 830902 843554 100801551 100819010 104646781 101264281 101268519 103847555 103834472 100854240 100854068 100257251 7461256 7466783 7486081 11433251 11434338 11411830 107928616 107905079 107949145 106402424 106365027 102597750 102589761 107061636 102614612 102617929 102627101 107770923 107812361 107805445
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