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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100272434   putative RING zinc finger domain superfamily protein 
 zma-r.6   100272434   putative RING zinc finger domain superfamily protein 
 zma-m.5   100272434   putative RING zinc finger domain superfamily protein 
 zma-u.5   103653664   RING-H2 finger protein ATL5 
 osa-u.5   4335997   RING-H2 finger protein ATL51 
 osa-u.5   9267130   E3 ubiquitin-protein ligase Os04g0590900-like 
 ath-u.5   AT4G33565   RING/U-box superfamily protein 
 ath-u.5   RING1   RING/U-box superfamily protein 
 ath-u.5   AT1G72220   RING/U-box superfamily protein 
 gma-u.5   102663026   RING-H2 finger protein ATL52 
 gma-u.5   100781245   RING-H2 finger protein ATL54 
 sly-u.5   101247705   RING-H2 finger protein ATL54 
 sly-u.5   101267886   RING-H2 finger protein ATL54-like 
 vvi-u.5   100854240   RING-H2 finger protein ATL54 
 vvi-u.5   100257251   RING-H2 finger protein ATL54 
 vvi-u.5   100854068   RING-H2 finger protein ATL54 
 ppo-u.5   7455184   RING-H2 finger protein ATL52 
 ppo-u.5   7461803   RING-H2 finger protein ATL54 
 ppo-u.5   7461256   E3 ubiquitin-protein ligase RING1 
 mtr-u.5   11411830   RING-H2 finger protein ATL54 
 mtr-u.5   11433251   RING-H2 finger protein ATL54 
 mtr-u.5   11434338   RING-H2 finger protein ATL54 

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Top 50 coexpressed genes to 100272434 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100272434 (zma-u.5 coexpression data)

CoexMap"100272434"


zmaLOC100272434 | Entrez gene ID : 100272434      
Species zma osa ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 4 2 3 2 2 3 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (391 genes)  IEA  
GO CC
GO MF
GO:0016740 [list] [network] transferase activity  (4165 genes)  IEA  
Protein NP_001140381.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  extr 1,  nucl 1,  mito 1,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for NP_001140381.1)
Subcellular
localization
TargetP
mito 5  (predict for NP_001140381.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100272434
zma-r.6
for
100272434
zma-m.5
for
100272434
zma-u.5
for
103653664
osa-u.5
for
4335997
osa-u.5
for
9267130
ath-u.5
for
AT4G33565
ath-u.5
for
RING1
ath-u.5
for
AT1G72220
gma-u.5
for
102663026
gma-u.5
for
100781245
sly-u.5
for
101247705
sly-u.5
for
101267886
vvi-u.5
for
100854240
vvi-u.5
for
100257251
vvi-u.5
for
100854068
ppo-u.5
for
7455184
ppo-u.5
for
7461803
ppo-u.5
for
7461256
mtr-u.5
for
11411830
mtr-u.5
for
11433251
mtr-u.5
for
11434338


Ortholog ID: 1245
Species zma zma sbi sbi osa osa hvu hvu bdi ath ath gma sly sly bra bra vvi vvi ppo ppo mtr mtr ghi ghi bna sot sot cit cit nta nta
Symbol LOC103653664 LOC100272434 LOC8072614 LOC8073398 LOC4335997 LOC9267130 LOC123426868 LOC123411554 LOC100836409 AT1G72220 AT4G33565 LOC100801551 LOC101268519 LOC104646781 LOC103834472 LOC103847555 LOC100854068 LOC100854240 LOC7466783 LOC7486081 LOC11433251 LOC11434338 LOC107928616 LOC107905079 LOC106365027 LOC102589761 LOC102597750 LOC102627101 LOC102617929 LOC107805445 LOC107812361
Function* RING-H2 finger protein ATL5 putative RING zinc finger domain superfamily protein E3 ubiquitin-protein ligase RING1 RING-H2 finger protein ATL51 RING-H2 finger protein ATL51 E3 ubiquitin-protein ligase Os04g0590900-like RING-H2 finger protein ATL52-like E3 ubiquitin-protein ligase RING1-like RING-H2 finger protein ATL52 RING/U-box superfamily protein RING/U-box superfamily protein RING-H2 finger protein ATL54-like RING-H2 finger protein ATL54-like RING-H2 finger protein ATL54-like RING-H2 finger protein ATL54 E3 ubiquitin-protein ligase RING1 RING-H2 finger protein ATL54 RING-H2 finger protein ATL54 E3 ubiquitin-protein ligase RING1 RING-H2 finger protein ATL54 RING-H2 finger protein ATL54 RING-H2 finger protein ATL54 RING-H2 finger protein ATL54 RING-H2 finger protein ATL54 RING-H2 finger protein ATL54-like E3 ubiquitin-protein ligase RING1-like RING-H2 finger protein ATL54-like RING-H2 finger protein ATL52-like RING-H2 finger protein ATL54-like RING-H2 finger protein ATL54-like uncharacterized LOC107812361
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00940 Phenylpropanoid biosynthesis 6
vvi00941 Flavonoid biosynthesis 4
vvi00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 4
vvi04016 MAPK signaling pathway - plant 2
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03250 Viral life cycle - HIV-1 2
ghi03272 Virion - Hepatitis viruses 2
ghi04144 Endocytosis 2
ghi00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 4
sot00941 Flavonoid biosynthesis 3
sot00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 3
sot00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot02010 ABC transporters 2
sot00620 Pyruvate metabolism 2
sot00710 Carbon fixation by Calvin cycle 2
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00480 Glutathione metabolism 4
cit02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103653664 100272434 8072614 8073398 4335997 9267130 123426868 123411554 100836409 843554 829496 100801551 101268519 104646781 103834472 103847555 100854068 100854240 7466783 7486081 11433251 11434338 107928616 107905079 106365027 102589761 102597750 102627101 102617929 107805445 107812361
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