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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7455184   RING-H2 finger protein ATL52 
 ppo-r.4   7455184   RING-H2 finger protein ATL52 
 ppo-u.5   7461803   RING-H2 finger protein ATL54 
 ppo-u.5   7466783   E3 ubiquitin-protein ligase RING1 
 ppo-u.5   7461256   E3 ubiquitin-protein ligase RING1 
 gma-u.5   102663026   RING-H2 finger protein ATL52 
 gma-u.5   100781245   RING-H2 finger protein ATL54 
 mtr-u.5   11411830   RING-H2 finger protein ATL54 
 mtr-u.5   25501862   E3 ubiquitin-protein ligase RING1 
 mtr-u.5   11434338   RING-H2 finger protein ATL54 
 ath-u.5   AT4G33565   RING/U-box superfamily protein 
 ath-u.5   RING1   RING/U-box superfamily protein 
 ath-u.5   AT1G72220   RING/U-box superfamily protein 
 vvi-u.5   100854240   RING-H2 finger protein ATL54 
 vvi-u.5   100854068   RING-H2 finger protein ATL54 
 vvi-u.5   100257251   RING-H2 finger protein ATL54 
 sly-u.5   101247705   RING-H2 finger protein ATL54 
 sly-u.5   101267886   RING-H2 finger protein ATL54-like 
 osa-u.5   9267130   E3 ubiquitin-protein ligase Os04g0590900-like 
 osa-u.5   4335997   RING-H2 finger protein ATL51 
 zma-u.5   100272434   putative RING zinc finger domain superfamily protein 
 zma-u.5   103653664   RING-H2 finger protein ATL5 

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Top 50 coexpressed genes to 7455184 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7455184 (ppo-u.5 coexpression data)

CoexMap"7455184"


ppoLOC7455184 | Entrez gene ID : 7455184    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 2 3 3 3 2 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (417 genes)  IEA  
GO CC
GO MF
GO:0016740 [list] [network] transferase activity  (4072 genes)  IEA  
Protein XP_052309390.1 [sequence] [blastp]
Subcellular
localization
wolf
extr 5,  vacu 1,  chlo 1,  nucl 1,  cyto 1,  mito 1,  plas 1,  cyto_nucl 1,  chlo_mito 1,  nucl_plas 1,  E.R._vacu 1,  mito_plas 1,  cyto_plas 1  (predict for XP_052309390.1)
Subcellular
localization
TargetP
other 4  (predict for XP_052309390.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7455184

.
ppo-r.4
for
7455184

.
ppo-u.5
for
7461803

.
ppo-u.5
for
7466783

.
ppo-u.5
for
7461256

.
gma-u.5
for
102663026

.
gma-u.5
for
100781245

.
mtr-u.5
for
11411830

.
mtr-u.5
for
25501862

.
mtr-u.5
for
11434338

.
ath-u.5
for
AT4G33565

.
ath-u.5
for
RING1

.
ath-u.5
for
AT1G72220

.
vvi-u.5
for
100854240

.
vvi-u.5
for
100854068

.
vvi-u.5
for
100257251

.
sly-u.5
for
101247705

.
sly-u.5
for
101267886

.
osa-u.5
for
9267130

.
osa-u.5
for
4335997

.
zma-u.5
for
100272434

.
zma-u.5
for
103653664

.


Ortholog ID: 1245
Species ath ath gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr hvu hvu ghi ghi bna sbi sbi sot sot cit cit bdi nta nta
Symbol AT1G72220 AT4G33565 LOC100801551 LOC101268519 LOC104646781 LOC4335997 LOC9267130 LOC103653664 LOC100272434 LOC103834472 LOC103847555 LOC100854068 LOC100854240 LOC7466783 LOC7486081 LOC11433251 LOC11434338 LOC123426868 LOC123411554 LOC107928616 LOC107905079 LOC106365027 LOC8072614 LOC8073398 LOC102589761 LOC102597750 LOC102627101 LOC102617929 LOC100836409 LOC107805445 LOC107812361
Function* RING/U-box superfamily protein RING/U-box superfamily protein RING-H2 finger protein ATL54-like RING-H2 finger protein ATL54-like RING-H2 finger protein ATL54-like RING-H2 finger protein ATL51 E3 ubiquitin-protein ligase Os04g0590900-like RING-H2 finger protein ATL5 putative RING zinc finger domain superfamily protein RING-H2 finger protein ATL54 E3 ubiquitin-protein ligase RING1 RING-H2 finger protein ATL54 RING-H2 finger protein ATL54 E3 ubiquitin-protein ligase RING1 RING-H2 finger protein ATL54 RING-H2 finger protein ATL54 RING-H2 finger protein ATL54 RING-H2 finger protein ATL52-like E3 ubiquitin-protein ligase RING1-like RING-H2 finger protein ATL54 RING-H2 finger protein ATL54 RING-H2 finger protein ATL54-like E3 ubiquitin-protein ligase RING1 RING-H2 finger protein ATL51 E3 ubiquitin-protein ligase RING1-like RING-H2 finger protein ATL54-like RING-H2 finger protein ATL52-like RING-H2 finger protein ATL54-like RING-H2 finger protein ATL52 RING-H2 finger protein ATL54-like uncharacterized LOC107812361
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00940 Phenylpropanoid biosynthesis 6
vvi00941 Flavonoid biosynthesis 4
vvi00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 4
vvi04016 MAPK signaling pathway - plant 2
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03250 Viral life cycle - HIV-1 2
ghi03272 Virion - Hepatitis viruses 2
ghi04144 Endocytosis 2
ghi00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 4
sot00941 Flavonoid biosynthesis 3
sot00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 3
sot00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot02010 ABC transporters 2
sot00620 Pyruvate metabolism 2
sot00710 Carbon fixation by Calvin cycle 2
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00480 Glutathione metabolism 4
cit02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843554 829496 100801551 101268519 104646781 4335997 9267130 103653664 100272434 103834472 103847555 100854068 100854240 7466783 7486081 11433251 11434338 123426868 123411554 107928616 107905079 106365027 8072614 8073398 102589761 102597750 102627101 102617929 100836409 107805445 107812361
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