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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123413079   probable ubiquitin conjugation factor E4 
 osa-u.5   4333165   probable ubiquitin conjugation factor E4 
 zma-u.5   103636597   probable ubiquitin conjugation factor E4 
 zma-u.5   103639061   probable ubiquitin conjugation factor E4 
 ath-u.5   AT5G15400   U-box domain-containing protein 
 gma-u.5   100811444   probable ubiquitin conjugation factor E4 
 gma-u.5   100806175   probable ubiquitin conjugation factor E4 
 sly-u.5   101267369   probable ubiquitin conjugation factor E4 
 vvi-u.5   100250848   probable ubiquitin conjugation factor E4 
 ppo-u.5   7467871   probable ubiquitin conjugation factor E4 
 ppo-u.5   112323212   probable ubiquitin conjugation factor E4 
 mtr-u.5   11412513   probable ubiquitin conjugation factor E4 

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Top 50 coexpressed genes to 123413079 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123413079 (hvu-r.1 coexpression data)

CoexMap"123413079"


hvuLOC123413079 | Entrez gene ID : 123413079    
Species hvu osa zma ath gma sly vvi ppo mtr bdi bra cit bna sbi ghi sot nta cre tae
Paralog 1 1 2 1 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG hvg04120 [list] [network] Ubiquitin mediated proteolysis (227 genes)
hvg04141 [list] [network] Protein processing in endoplasmic reticulum (282 genes)
GO BP
GO:0000209 [list] [network] protein polyubiquitination  (85 genes)  IEA  
GO CC
GO:0000151 [list] [network] ubiquitin ligase complex  (158 genes)  IEA  
GO:0005634 [list] [network] nucleus  (3241 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (5514 genes)  IEA  
GO MF
GO:0034450 [list] [network] ubiquitin-ubiquitin ligase activity  (2 genes)  IEA  
Protein XP_044961959.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 2,  cyto 2,  cyto_nucl 2  (predict for XP_044961959.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_044961959.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123413079
osa-u.5
for
4333165
zma-u.5
for
103636597
zma-u.5
for
103639061
ath-u.5
for
AT5G15400
gma-u.5
for
100811444
gma-u.5
for
100806175
sly-u.5
for
101267369
vvi-u.5
for
100250848
ppo-u.5
for
7467871
ppo-u.5
for
112323212
mtr-u.5
for
11412513


Ortholog ID: 6966
Species hvu tae tae bdi osa zma zma sbi ath gma gma bra bra vvi ppo ppo mtr ghi ghi bna bna sot sot cit nta nta cre
Symbol LOC123413079 LOC123167814 LOC123149201 LOC100835300 LOC4333165 LOC103639061 LOC103636597 LOC8066278 AT5G15400 LOC100806175 LOC100811444 LOC103846414 LOC103850982 LOC100250848 LOC7467871 LOC112323212 LOC11412513 LOC107888562 LOC121221099 LOC106372151 LOC106372152 LOC102595360 LOC102593467 LOC102621796 LOC107777862 LOC107827966 CHLRE_09g398350v5
Function* probable ubiquitin conjugation factor E4 probable ubiquitin conjugation factor E4 probable ubiquitin conjugation factor E4 probable ubiquitin conjugation factor E4 probable ubiquitin conjugation factor E4 probable ubiquitin conjugation factor E4 probable ubiquitin conjugation factor E4 probable ubiquitin conjugation factor E4 U-box domain-containing protein probable ubiquitin conjugation factor E4 probable ubiquitin conjugation factor E4 probable ubiquitin conjugation factor E4 probable ubiquitin conjugation factor E4 probable ubiquitin conjugation factor E4 probable ubiquitin conjugation factor E4 probable ubiquitin conjugation factor E4 probable ubiquitin conjugation factor E4 probable ubiquitin conjugation factor E4 probable ubiquitin conjugation factor E4 probable ubiquitin conjugation factor E4 probable ubiquitin conjugation factor E4 probable ubiquitin conjugation factor E4 probable ubiquitin conjugation factor E4 probable ubiquitin conjugation factor E4 putative ubiquitin conjugation factor E4 putative ubiquitin conjugation factor E4 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 6
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 9
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 8
tae04120 Ubiquitin mediated proteolysis 2
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 3
osa04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 6
zma04141 Protein processing in endoplasmic reticulum 3
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 7
zma04141 Protein processing in endoplasmic reticulum 4
zma03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 5
sbi03083 Polycomb repressive complex 2
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 4
ath03050 Proteasome 4
ath04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 5
gma03420 Nucleotide excision repair 3
gma03020 RNA polymerase 2
gma04141 Protein processing in endoplasmic reticulum 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 4
bra04120 Ubiquitin mediated proteolysis 3
bra03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 4
bra04120 Ubiquitin mediated proteolysis 3
bra03015 mRNA surveillance pathway 2
bra03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 4
ppo04141 Protein processing in endoplasmic reticulum 4
ppo04144 Endocytosis 2
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
ppo04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 3
mtr03420 Nucleotide excision repair 2
mtr00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 4
ghi04120 Ubiquitin mediated proteolysis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 4
ghi04120 Ubiquitin mediated proteolysis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 9
bna03420 Nucleotide excision repair 8
bna03460 Fanconi anemia pathway 4
bna04141 Protein processing in endoplasmic reticulum 3
bna00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03420 Nucleotide excision repair 8
bna04120 Ubiquitin mediated proteolysis 8
bna03460 Fanconi anemia pathway 4
bna04141 Protein processing in endoplasmic reticulum 3
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 3
sot03083 Polycomb repressive complex 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 3
sot04120 Ubiquitin mediated proteolysis 2
sot00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03420 Nucleotide excision repair 3
cit03040 Spliceosome 2
cit03020 RNA polymerase 2
cit00562 Inositol phosphate metabolism 2
cit04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 4
nta03083 Polycomb repressive complex 2
nta03250 Viral life cycle - HIV-1 2
nta02010 ABC transporters 2
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 4
nta04146 Peroxisome 3
nta03022 Basal transcription factors 3
nta04141 Protein processing in endoplasmic reticulum 3
nta02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123413079 123167814 123149201 100835300 4333165 103639061 103636597 8066278 831392 100806175 100811444 103846414 103850982 100250848 7467871 112323212 11412513 107888562 121221099 106372151 106372152 102595360 102593467 102621796 107777862 107827966 5720205
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