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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123425182   29 kDa ribonucleoprotein A, chloroplastic-like 
 hvu-r.1   123448659   RNA-binding protein CP29B, chloroplastic-like 
 tae-r.2   123044103   29 kDa ribonucleoprotein A, chloroplastic 
 tae-r.2   123051986   29 kDa ribonucleoprotein A, chloroplastic 
 tae-r.2   123085968   RNA-binding protein CP29B, chloroplastic 
 bdi-r.1   100826795   RNA-binding protein CP29B, chloroplastic 
 bdi-r.1   100832013   RNA-binding protein CP29B, chloroplastic 
 osa-u.5   4332957   RNA-binding protein CP29B, chloroplastic 
 osa-u.5   4344001   29 kDa ribonucleoprotein A, chloroplastic 
 zma-u.5   100285364   uncharacterized LOC100285364 
 zma-u.5   100274547   uncharacterized LOC100274547 
 zma-u.5   100282223   uncharacterized LOC100282223 
 sbi-r.1   8079368   RNA-binding protein CP29B, chloroplastic 
 sbi-r.1   8080763   RNA-binding protein CP29B, chloroplastic 
 ath-u.5   AT2G37220   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-u.5   CP29   chloroplast RNA-binding protein 29 
 gma-u.5   100812934   ribonucleoprotein At2g37220, chloroplastic-like 
 gma-u.5   100786275   RNA-binding (RRM/RBD/RNP motifs) family protein 
 sly-u.5   101255645   29 kDa ribonucleoprotein B, chloroplastic 
 sly-u.5   101245790   29 kDa ribonucleoprotein A, chloroplastic 
 bra-r.6   103867216   RNA-binding protein CP29B, chloroplastic 
 bra-r.6   103841271   29 kDa ribonucleoprotein, chloroplastic 
 bra-r.6   103857667   RNA-binding protein CP29B, chloroplastic 
 vvi-u.5   100246501   29 kDa ribonucleoprotein A, chloroplastic 
 ppo-u.5   18100185   RNA-binding protein CP29B, chloroplastic 
 ppo-u.5   7486483   RNA-binding protein CP29B, chloroplastic 
 mtr-u.5   11433272   29 kDa ribonucleoprotein A, chloroplastic 
 ghi-r.1   107899636   29 kDa ribonucleoprotein A, chloroplastic 
 ghi-r.1   107891135   29 kDa ribonucleoprotein A, chloroplastic 
 ghi-r.1   107889598   29 kDa ribonucleoprotein A, chloroplastic 
 bna-r.1   106382808   29 kDa ribonucleoprotein, chloroplastic 
 bna-r.1   106392732   RNA-binding protein CP29B, chloroplastic 
 bna-r.1   106352831   29 kDa ribonucleoprotein, chloroplastic-like 
 sot-r.1   102585227   29 kDa ribonucleoprotein B, chloroplastic-like 
 sot-r.1   102577524   single-stranded DNA binding protein precursor 
 cit-r.1   102621789   RNA-binding protein CP29B, chloroplastic 
 nta-r.1   107824003   29 kDa ribonucleoprotein A, chloroplastic 
 nta-r.1   107815238   29 kDa ribonucleoprotein A, chloroplastic 
 nta-r.1   107792669   29 kDa ribonucleoprotein B, chloroplastic 

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Top 50 coexpressed genes to 123425182 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123425182 (hvu-r.1 coexpression data)

CoexMap"123425182"


hvuLOC123425182 | Entrez gene ID : 123425182    
Species hvu tae bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 3 2 2 3 2 2 2 2 3 1 2 1 3 3 2 1 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005829 [list] [network] cytosol  (938 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (308 genes)  IEA  
Protein XP_044964795.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_044964795.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_044964795.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123425182
hvu-r.1
for
123448659
tae-r.2
for
123044103
tae-r.2
for
123051986
tae-r.2
for
123085968
bdi-r.1
for
100826795
bdi-r.1
for
100832013
osa-u.5
for
4332957
osa-u.5
for
4344001
zma-u.5
for
100285364
zma-u.5
for
100274547
zma-u.5
for
100282223
sbi-r.1
for
8079368
sbi-r.1
for
8080763
ath-u.5
for
AT2G37220
ath-u.5
for
CP29
gma-u.5
for
100812934
gma-u.5
for
100786275
sly-u.5
for
101255645
sly-u.5
for
101245790
bra-r.6
for
103867216
bra-r.6
for
103841271
bra-r.6
for
103857667
vvi-u.5
for
100246501
ppo-u.5
for
18100185
ppo-u.5
for
7486483
mtr-u.5
for
11433272
ghi-r.1
for
107899636
ghi-r.1
for
107891135
ghi-r.1
for
107889598
bna-r.1
for
106382808
bna-r.1
for
106392732
bna-r.1
for
106352831
sot-r.1
for
102585227
sot-r.1
for
102577524
cit-r.1
for
102621789
nta-r.1
for
107824003
nta-r.1
for
107815238
nta-r.1
for
107792669


Ortholog ID: 3319
Species hvu hvu tae tae tae bdi bdi osa osa zma zma zma sbi sbi ath ath gma gma sly sly bra bra bra vvi ppo ppo mtr ghi ghi ghi bna bna bna sot sot cit nta nta nta
Symbol LOC123425182 LOC123448659 LOC123044103 LOC123092005 LOC123187853 LOC100826795 LOC100832013 LOC4332957 LOC4344001 LOC100285364 LOC100274547 LOC100282223 LOC8079368 LOC8080763 AT2G37220 CP29 LOC100812934 LOC100786275 LOC101255645 LOC101245790 LOC103867216 LOC103857667 LOC103865583 LOC100246501 LOC18100185 LOC7486483 LOC11433272 LOC107891135 LOC107889598 LOC107948368 LOC106392732 LOC106366108 LOC106441071 LOC102585227 LOC102577524 LOC102621789 LOC107815238 LOC107792669 LOC107814688
Function* 29 kDa ribonucleoprotein A, chloroplastic-like RNA-binding protein CP29B, chloroplastic-like 29 kDa ribonucleoprotein A, chloroplastic RNA-binding protein CP29B, chloroplastic 29 kDa ribonucleoprotein A, chloroplastic RNA-binding protein CP29B, chloroplastic RNA-binding protein CP29B, chloroplastic RNA-binding protein CP29B, chloroplastic 29 kDa ribonucleoprotein A, chloroplastic uncharacterized LOC100285364 uncharacterized LOC100274547 uncharacterized LOC100282223 RNA-binding protein CP29B, chloroplastic RNA-binding protein CP29B, chloroplastic RNA-binding (RRM/RBD/RNP motifs) family protein chloroplast RNA-binding protein 29 ribonucleoprotein At2g37220, chloroplastic-like RNA-binding (RRM/RBD/RNP motifs) family protein 29 kDa ribonucleoprotein B, chloroplastic 29 kDa ribonucleoprotein A, chloroplastic RNA-binding protein CP29B, chloroplastic RNA-binding protein CP29B, chloroplastic RNA-binding protein CP29B, chloroplastic 29 kDa ribonucleoprotein A, chloroplastic RNA-binding protein CP29B, chloroplastic RNA-binding protein CP29B, chloroplastic 29 kDa ribonucleoprotein A, chloroplastic 29 kDa ribonucleoprotein A, chloroplastic 29 kDa ribonucleoprotein A, chloroplastic 29 kDa ribonucleoprotein A, chloroplastic RNA-binding protein CP29B, chloroplastic 29 kDa ribonucleoprotein, chloroplastic RNA-binding protein CP29B, chloroplastic 29 kDa ribonucleoprotein B, chloroplastic-like single-stranded DNA binding protein precursor RNA-binding protein CP29B, chloroplastic 29 kDa ribonucleoprotein A, chloroplastic 29 kDa ribonucleoprotein B, chloroplastic 31 kDa ribonucleoprotein, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00860 Porphyrin metabolism 3
hvu03018 RNA degradation 2
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 3
bdi00860 Porphyrin metabolism 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 2
zma03060 Protein export 2
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01240 Biosynthesis of cofactors 3
vvi03010 Ribosome 2
vvi00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00340 Histidine metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00340 Histidine metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00020 Citrate cycle (TCA cycle) 2
sot00270 Cysteine and methionine metabolism 2
sot00566 Sulfoquinovose metabolism 2
sot00620 Pyruvate metabolism 2
sot00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 5
sot04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123425182 123448659 123044103 123092005 123187853 100826795 100832013 4332957 4344001 100285364 100274547 100282223 8079368 8080763 818299 824514 100812934 100786275 101255645 101245790 103867216 103857667 103865583 100246501 18100185 7486483 11433272 107891135 107889598 107948368 106392732 106366108 106441071 102585227 102577524 102621789 107815238 107792669 107814688
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