ATTED-II : GeneCoexpression result

Species	Gene	Description
hvu-r.1	123425183	exosome complex component RRP41-like
osa-u.5	4344519	exosome complex component RRP41-like
osa-u.5	9269241	exosome complex component RRP41-like
zma-u.5	100382718	Exosome complex component RRP41-like
ath-u.5	RRP41L	3'-5'-exoribonuclease family protein
gma-u.5	100819105	exosome complex component RRP41-like
gma-u.5	100816271	exosome complex component RRP41-like
sly-u.5	101260939	exosome complex component RRP41-like
vvi-u.5	100251840	exosome complex component RRP41-like
ppo-u.5	18098212	exosome complex component RRP41-like
ppo-u.5	7491150	exosome complex component RRP41-like
mtr-u.5	11410037	exosome complex component RRP41-like

functional annotation

KEGG

hvg03018 [list] [network] RNA degradation (115 genes)

GO BP

GO:0016075 [list] [network] rRNA catabolic process	(7 genes)	IEA
GO:0071028 [list] [network] nuclear mRNA surveillance	(7 genes)	IEA
GO:0071051 [list] [network] poly(A)-dependent snoRNA 3'-end processing	(9 genes)	IEA
GO:0034475 [list] [network] U4 snRNA 3'-end processing	(10 genes)	IEA

GO CC

GO:0000177 [list] [network] cytoplasmic exosome (RNase complex)	(11 genes)	IEA
GO:0000176 [list] [network] nuclear exosome (RNase complex)	(15 genes)	IEA
GO:0005730 [list] [network] nucleolus	(205 genes)	IEA

GO MF

Protein

XP_044964796.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 3, E.R._plas 3, chlo 2, E.R. 1, cyto 1, chlo_mito 1

(predict for XP_044964796.1)

Subcellular
localization
TargetP

chlo 6, other 3

(predict for XP_044964796.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	hvu-r.1 for 123425183	osa-u.5 for 4344519	osa-u.5 for 9269241	zma-u.5 for 100382718	ath-u.5 for RRP41L	gma-u.5 for 100819105	gma-u.5 for 100816271	sly-u.5 for 101260939	vvi-u.5 for 100251840	ppo-u.5 for 18098212	ppo-u.5 for 7491150	mtr-u.5 for 11410037

Ortholog ID: 9048

Species

hvu

tae

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

cit

nta

cre

Symbol

RRP41L

Function^*

exosome complex component RRP41-like

Exosome complex component RRP41-like

exosome complex component RRP41-like

3'-5'-exoribonuclease family protein

exosome complex component RRP41-like

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03018	RNA degradation	3
tae03008	Ribosome biogenesis in eukaryotes	3
tae03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03018	RNA degradation	5
tae03008	Ribosome biogenesis in eukaryotes	5
tae03440	Homologous recombination	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03018	RNA degradation	2
osa03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03018	RNA degradation	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	19
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	6
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	4
bra03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	4
vvi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00230	Purine metabolism	2
ppo00240	Pyrimidine metabolism	2
ppo00480	Glutathione metabolism	2
ppo01232	Nucleotide metabolism	2
ppo04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	3
ghi00970	Aminoacyl-tRNA biosynthesis	2
ghi03018	RNA degradation	2
ghi03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	3
ghi00970	Aminoacyl-tRNA biosynthesis	2
ghi03018	RNA degradation	2
ghi03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03008	Ribosome biogenesis in eukaryotes	4
bna03018	RNA degradation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03008	Ribosome biogenesis in eukaryotes	5
bna03018	RNA degradation	2
bna03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	2
nta03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	2

Expression

Expression pattern

Entrez Gene ID^*

123425183

123044104

123187854

100831709

4344519

9269241

100382718

8079367

828858

100816271

100819105

101260939

103867212

100251840

18098212

7491150

11410037

107906248

107959013

106445923

106376109

102620951

107827829

107816340

5717363

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 123425183 (hvu-r.1 coexpression data)

Top 50 enrichment test to 123425183 (hvu-r.1 coexpression data)


Species	hvu	osa	zma	ath	gma	sly	vvi	ppo	mtr	bdi	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	1	2	1	1	2	1	1	2	1	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123425183 (hvu-r.1 coexpression data)

Top 50 enrichment test to 123425183 (hvu-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**