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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8079367   exosome complex component RRP41-like 
 zma-u.5   100382718   Exosome complex component RRP41-like 
 osa-u.5   4344519   exosome complex component RRP41-like 
 osa-u.5   9269241   exosome complex component RRP41-like 
 ath-u.5   RRP41L   3'-5'-exoribonuclease family protein 
 gma-u.5   100819105   exosome complex component RRP41-like 
 gma-u.5   100816271   exosome complex component RRP41-like 
 sly-u.5   101260939   exosome complex component RRP41-like 
 vvi-u.5   100251840   exosome complex component RRP41-like 
 ppo-u.5   18098212   exosome complex component RRP41-like 
 ppo-u.5   7491150   exosome complex component RRP41-like 
 mtr-u.5   11410037   exosome complex component RRP41-like 

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Top 50 coexpressed genes to 8079367 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8079367 (sbi-r.1 coexpression data)

CoexMap"8079367"


sbiLOC8079367 | Entrez gene ID : 8079367      
Species sbi zma osa ath gma sly vvi ppo mtr hvu sot tae nta bra cit ghi bna bdi cre
Paralog 1 1 2 1 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03018 [list] [network] RNA degradation (112 genes)
GO BP
GO:0016075 [list] [network] rRNA catabolic process  (6 genes)  IEA  
GO:0071028 [list] [network] nuclear mRNA surveillance  (9 genes)  IEA  
GO:0071051 [list] [network] poly(A)-dependent snoRNA 3'-end processing  (10 genes)  IEA  
GO:0034475 [list] [network] U4 snRNA 3'-end processing  (11 genes)  IEA  
GO CC
GO:0000177 [list] [network] cytoplasmic exosome (RNase complex)  (12 genes)  IEA  
GO:0000176 [list] [network] nuclear exosome (RNase complex)  (17 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (194 genes)  IEA  
GO MF
Protein XP_002461075.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  E.R. 2,  plas 1,  extr 1,  vacu 1  (predict for XP_002461075.1)
Subcellular
localization
TargetP
other 6  (predict for XP_002461075.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8079367

.
zma-u.5
for
100382718

.
osa-u.5
for
4344519

.
osa-u.5
for
9269241

.
ath-u.5
for
RRP41L

.
gma-u.5
for
100819105

.
gma-u.5
for
100816271

.
sly-u.5
for
101260939

.
vvi-u.5
for
100251840

.
ppo-u.5
for
18098212

.
ppo-u.5
for
7491150

.
mtr-u.5
for
11410037

.


Ortholog ID: 9048
Species ath gma gma sly osa osa zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi cit bdi nta nta
Symbol RRP41L LOC100816271 LOC100819105 LOC101260939 LOC4344519 LOC9269241 LOC100382718 LOC103867212 LOC100251840 LOC18098212 LOC7491150 LOC11410037 LOC123044104 LOC123187854 LOC123425183 LOC107906248 LOC107959013 LOC106445923 LOC106376109 CHLRE_17g697624v5 LOC8079367 LOC102620951 LOC100831709 LOC107827829 LOC107816340
Function* 3'-5'-exoribonuclease family protein exosome complex component RRP41-like exosome complex component RRP41-like exosome complex component RRP41-like exosome complex component RRP41-like exosome complex component RRP41-like Exosome complex component RRP41-like exosome complex component RRP41-like exosome complex component RRP41-like exosome complex component RRP41-like exosome complex component RRP41-like exosome complex component RRP41-like exosome complex component RRP41-like exosome complex component RRP41-like exosome complex component RRP41-like exosome complex component RRP41-like exosome complex component RRP41-like exosome complex component RRP41-like exosome complex component RRP41-like uncharacterized protein exosome complex component RRP41-like exosome complex component RRP41-like exosome complex component RRP41-like exosome complex component RRP41-like exosome complex component RRP41-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 19
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 2
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
vvi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00230 Purine metabolism 2
ppo00240 Pyrimidine metabolism 2
ppo00480 Glutathione metabolism 2
ppo01232 Nucleotide metabolism 2
ppo04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae03008 Ribosome biogenesis in eukaryotes 3
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 5
tae03008 Ribosome biogenesis in eukaryotes 5
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 3
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi03018 RNA degradation 2
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 3
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi03018 RNA degradation 2
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 5
bna03018 RNA degradation 2
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828858 100816271 100819105 101260939 4344519 9269241 100382718 103867212 100251840 18098212 7491150 11410037 123044104 123187854 123425183 107906248 107959013 106445923 106376109 5717363 8079367 102620951 100831709 107827829 107816340
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