ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
hvu-r.1	123426237	putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179
osa-u.5	4334363	MD-2-related lipid-recognition protein ROSY1
osa-u.5	4342446	MD-2-related lipid-recognition protein ROSY1
zma-u.5	100193299	ML domain protein
zma-u.5	100273402	uncharacterized LOC100273402
ath-u.5	AT3G11780	MD-2-related lipid recognition domain-containing protein / ML domain-containing protein
ath-u.5	AT3G44100	MD-2-related lipid recognition domain-containing protein
ath-u.5	AT5G06480	Immunoglobulin E-set superfamily protein
gma-u.5	100500637	MD-2-related lipid recognition domain-containing protein
gma-u.5	100500058	uncharacterized LOC100500058
gma-u.5	100306609	uncharacterized LOC100306609
sly-u.5	101249001	uncharacterized LOC101249001
sly-u.5	101246488	uncharacterized LOC101246488
vvi-u.5	100257110	uncharacterized LOC100257110
vvi-u.5	100244437	putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179-like
ppo-u.5	7455603	MD-2-related lipid-recognition protein ROSY1
ppo-u.5	7469934	uncharacterized LOC7469934
mtr-u.5	11439874	putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179
mtr-u.5	11434684	phosphatidylglycerol/phosphatidylinositol transfer protein
mtr-u.5	25483672	putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179

Top 50 coexpressed genes to 123426237 (hvu-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123426237 (hvu-r.1 coexpression data)

CoexMap"123426237"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0032366 [list] [network] intracellular sterol transport

(4 genes)

IEA

GO CC

GO MF

GO:0032934 [list] [network] sterol binding

(11 genes)

IEA

Protein

XP_044965974.1 [sequence] [blastp]

Subcellular
localization
wolf

extr 5, chlo 4, cyto 1, vacu 1

(predict for XP_044965974.1)

Subcellular
localization
TargetP

scret 9

(predict for XP_044965974.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	hvu-r.1 for 123426237	osa-u.5 for 4334363	osa-u.5 for 4342446	zma-u.5 for 100193299	zma-u.5 for 100273402	ath-u.5 for AT3G11780	ath-u.5 for AT3G44100	ath-u.5 for AT5G06480	gma-u.5 for 100500637	gma-u.5 for 100500058	gma-u.5 for 100306609	sly-u.5 for 101249001	sly-u.5 for 101246488	vvi-u.5 for 100257110	vvi-u.5 for 100244437	ppo-u.5 for 7455603	ppo-u.5 for 7469934	mtr-u.5 for 11439874	mtr-u.5 for 11434684	mtr-u.5 for 25483672

Ortholog

Ortholog ID: 1622

Species

hvu

tae

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

MD-2-related lipid-recognition protein ROSY1-like

putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179

MD-2-related lipid-recognition protein ROSY1

putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179

MD-2-related lipid-recognition protein ROSY1

ML domain protein

uncharacterized LOC100273402

putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179

putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282107

Immunoglobulin E-set superfamily protein

MD-2-related lipid recognition domain-containing protein / ML domain-containing protein

phosphatidylglycerol/phosphatidylinositol transfer protein-like

uncharacterized LOC100500058

uncharacterized LOC101246488

uncharacterized LOC101249001

putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179

uncharacterized LOC100257110

putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179-like

uncharacterized LOC7469934

MD-2-related lipid-recognition protein ROSY1

putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179

putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0278295

uncharacterized LOC102625954

uncharacterized LOC102626243

uncharacterized LOC107798808

uncharacterized LOC107768217

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00062	Fatty acid elongation	2
hvu01040	Biosynthesis of unsaturated fatty acids	2
hvu01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00350	Tyrosine metabolism	4
tae00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04145	Phagosome	5
bdi00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04136	Autophagy - other	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04142	Lysosome	7
zma00600	Sphingolipid metabolism	3
zma00220	Arginine biosynthesis	2
zma00250	Alanine, aspartate and glutamate metabolism	2
zma00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	3
ath04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01200	Carbon metabolism	3
sly00710	Carbon fixation by Calvin cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00100	Steroid biosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04136	Autophagy - other	2
vvi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00190	Oxidative phosphorylation	4
mtr04120	Ubiquitin mediated proteolysis	2
mtr00240	Pyrimidine metabolism	2
mtr00410	beta-Alanine metabolism	2
mtr00770	Pantothenate and CoA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03050	Proteasome	4
mtr04144	Endocytosis	2
mtr04145	Phagosome	2
mtr04148	Efferocytosis	2
mtr00240	Pyrimidine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04626	Plant-pathogen interaction	5
ghi04142	Lysosome	3
ghi00190	Oxidative phosphorylation	2
ghi04145	Phagosome	2
ghi03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04626	Plant-pathogen interaction	5
ghi04142	Lysosome	3
ghi00190	Oxidative phosphorylation	2
ghi04145	Phagosome	2
ghi03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04120	Ubiquitin mediated proteolysis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04120	Ubiquitin mediated proteolysis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	4
sot04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00970	Aminoacyl-tRNA biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	3
cit01240	Biosynthesis of cofactors	2
cit00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03050	Proteasome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00240	Pyrimidine metabolism	2
cre00410	beta-Alanine metabolism	2
cre00770	Pantothenate and CoA biosynthesis	2
cre00270	Cysteine and methionine metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

123452600

123426237

123052837

123105331

100838414

100840554

4334363

4342446

100193299

100273402

8084133

8081138

830536

820352

100818265

100500058

101246488

101249001

103846989

103845979

100257110

100244437

7469934

7455603

11439874

25483672

107899410

107948578

106413834

106452498

102584076

102589595

102625954

102626243

107798808

107768217

5726738

5718360

The preparation time of this page was 0.5 [sec].


Species	hvu	osa	zma	ath	gma	sly	vvi	ppo	mtr	bdi	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	1	2	2	3	3	2	2	2	3	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123426237 (hvu-r.1 coexpression data)

Top 50 enrichment test to 123426237 (hvu-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**