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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100823554   transcription factor bHLH110 
 zma-u.5   103649916   transcription factor bHLH110 
 ath-u.5   AT1G27660   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 gma-u.5   100782565   transcription factor bHLH111 
 sly-u.5   101267521   transcription factor bHLH110 
 bra-r.6   103835382   transcription factor bHLH110 
 vvi-u.5   100260944   transcription factor bHLH110 
 ppo-u.5   7479726   transcription factor bHLH110 
 ppo-u.5   7454376   transcription factor bHLH110 
 mtr-u.5   25490216   transcription factor bHLH110 
 ghi-r.1   107935403   transcription factor bHLH110 
 ghi-r.1   107943430   transcription factor bHLH110 
 ghi-r.1   107936552   transcription factor bHLH110 
 bna-r.1   106389580   transcription factor bHLH110 
 bna-r.1   106367912   transcription factor bHLH110-like 
 sot-r.1   102601100   transcription factor bHLH110 
 cit-r.1   102623049   transcription factor bHLH110 
 nta-r.1   107790733   transcription factor bHLH110 
 nta-r.1   107783563   transcription factor bHLH110 

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Top 50 coexpressed genes to 100823554 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100823554 (bdi-r.1 coexpression data)

CoexMap"123439379"


hvuLOC123439379 | Entrez gene ID : 123439379    
Species bdi zma ath gma sly bra vvi ppo mtr ghi bna sot cit nta osa tae sbi cre hvu
Paralog 1 1 1 1 1 1 1 2 1 3 2 1 1 2 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (404 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3241 genes)  IEA  
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (229 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (276 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (590 genes)  IEA  
Protein XP_044972033.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_044972033.1)
Subcellular
localization
TargetP
other 6,  chlo 3  (predict for XP_044972033.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100823554
zma-u.5
for
103649916
ath-u.5
for
AT1G27660
gma-u.5
for
100782565
sly-u.5
for
101267521
bra-r.6
for
103835382
vvi-u.5
for
100260944
ppo-u.5
for
7479726
ppo-u.5
for
7454376
mtr-u.5
for
25490216
ghi-r.1
for
107935403
ghi-r.1
for
107943430
ghi-r.1
for
107936552
bna-r.1
for
106389580
bna-r.1
for
106367912
sot-r.1
for
102601100
cit-r.1
for
102623049
nta-r.1
for
107790733
nta-r.1
for
107783563


Ortholog ID: 6145
Species bdi zma ath gma sly bra vvi ppo ppo mtr ghi ghi ghi bna bna sot cit nta nta
Symbol LOC100823554 LOC103649916 AT1G27660 LOC100782565 LOC101267521 LOC103835382 LOC100260944 LOC7479726 LOC7454376 LOC25490216 LOC107943430 LOC107936552 LOC107909419 LOC106389580 LOC106367912 LOC102601100 LOC102623049 LOC107790733 LOC107783563
Function* transcription factor bHLH110 transcription factor bHLH110 basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor bHLH111 transcription factor bHLH110 transcription factor bHLH110 transcription factor bHLH110 transcription factor bHLH110 transcription factor bHLH110 transcription factor bHLH110 transcription factor bHLH110 transcription factor bHLH110 transcription factor bHLH110 transcription factor bHLH110 transcription factor bHLH110-like transcription factor bHLH110 transcription factor bHLH110 transcription factor bHLH110 transcription factor bHLH110
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00564 Glycerophospholipid metabolism 2
zma00240 Pyrimidine metabolism 2
zma01232 Nucleotide metabolism 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00940 Phenylpropanoid biosynthesis 2
ghi03410 Base excision repair 2
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100823554 103649916 839658 100782565 101267521 103835382 100260944 7479726 7454376 25490216 107943430 107936552 107909419 106389580 106367912 102601100 102623049 107790733 107783563
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