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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123445660   U-box domain-containing protein 4 
 hvu-r.1   123444734   U-box domain-containing protein 4-like 
 tae-r.2   123072795   U-box domain-containing protein 4 
 tae-r.2   123062801   U-box domain-containing protein 4 
 tae-r.2   123080953   U-box domain-containing protein 4 
 bdi-r.1   100824267   U-box domain-containing protein 4 
 bdi-r.1   100823278   U-box domain-containing protein 4 
 osa-u.5   4344480   U-box domain-containing protein 4 
 zma-u.5   103653150   U-box domain-containing protein 4 
 zma-u.5   103652393   U-box domain-containing protein 4 
 zma-u.5   100501378   U-box domain-containing protein 4 
 sbi-r.1   8064368   U-box domain-containing protein 4 
 ath-u.5   PUB4   RING/U-box superfamily protein with ARM repeat domain-containing protein 
 gma-u.5   100813786   U-box domain-containing protein 4 
 gma-u.5   100794660   U-box domain-containing protein 4 
 gma-u.5   100777715   U-box domain-containing protein 4 
 sly-u.5   101244851   U-box domain-containing protein 4-like 
 sly-u.5   101265159   U-box domain-containing protein 4-like 
 bra-r.6   103842428   U-box domain-containing protein 4 
 vvi-u.5   100257770   U-box domain-containing protein 4 
 ppo-u.5   18101152   U-box domain-containing protein 4 
 ppo-u.5   7489758   U-box domain-containing protein 4 
 mtr-u.5   25491020   U-box domain-containing protein 4 
 ghi-r.1   107948562   U-box domain-containing protein 4 
 ghi-r.1   107945352   U-box domain-containing protein 4 
 ghi-r.1   107900225   U-box domain-containing protein 4 
 bna-r.1   125586338   U-box domain-containing protein 4-like 
 bna-r.1   106368654   U-box domain-containing protein 4 
 bna-r.1   106415644   U-box domain-containing protein 4-like 
 sot-r.1   102596946   U-box domain-containing protein 4-like 
 sot-r.1   102601332   U-box domain-containing protein 4-like 
 cit-r.1   102619744   U-box domain-containing protein 4 
 nta-r.1   107775661   U-box domain-containing protein 4-like 
 nta-r.1   107827358   U-box domain-containing protein 4 
 nta-r.1   107821059   U-box domain-containing protein 4-like 

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Top 50 coexpressed genes to 123445660 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123445660 (hvu-r.1 coexpression data)

CoexMap"123445660"


hvuLOC123445660 | Entrez gene ID : 123445660    
Species hvu tae bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 3 2 1 3 1 1 3 2 1 1 2 1 3 3 2 1 3 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (478 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3241 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (5514 genes)  IEA  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (356 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4692 genes)  IEA  
Protein XP_044978612.1 [sequence] [blastp]
XP_044978613.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  plas 2,  cyto_nucl 2,  cyto 2,  E.R._plas 2  (predict for XP_044978612.1)
nucl 4,  E.R._plas 2,  plas 1,  E.R. 1,  cyto 1,  mito 1,  pero 1,  cysk 1,  cyto_pero 1  (predict for XP_044978613.1)
Subcellular
localization
TargetP
other 6  (predict for XP_044978612.1)
other 6  (predict for XP_044978613.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123445660
hvu-r.1
for
123444734
tae-r.2
for
123072795
tae-r.2
for
123062801
tae-r.2
for
123080953
bdi-r.1
for
100824267
bdi-r.1
for
100823278
osa-u.5
for
4344480
zma-u.5
for
103653150
zma-u.5
for
103652393
zma-u.5
for
100501378
sbi-r.1
for
8064368
ath-u.5
for
PUB4
gma-u.5
for
100813786
gma-u.5
for
100794660
gma-u.5
for
100777715
sly-u.5
for
101244851
sly-u.5
for
101265159
bra-r.6
for
103842428
vvi-u.5
for
100257770
ppo-u.5
for
18101152
ppo-u.5
for
7489758
mtr-u.5
for
25491020
ghi-r.1
for
107948562
ghi-r.1
for
107945352
ghi-r.1
for
107900225
bna-r.1
for
125586338
bna-r.1
for
106368654
bna-r.1
for
106415644
sot-r.1
for
102596946
sot-r.1
for
102601332
cit-r.1
for
102619744
nta-r.1
for
107775661
nta-r.1
for
107827358
nta-r.1
for
107821059


Ortholog ID: 4348
Species hvu hvu tae tae tae bdi bdi osa zma zma zma sbi ath gma gma gma sly sly bra vvi ppo ppo mtr ghi ghi ghi bna bna sot sot cit nta nta nta
Symbol LOC123445660 LOC123444734 LOC123072795 LOC123062801 LOC123063637 LOC100824267 LOC100823278 LOC4344480 LOC103653150 LOC103652393 LOC100501378 LOC8064368 PUB4 LOC100813786 LOC100794660 LOC100811250 LOC101244851 LOC101265159 LOC103842428 LOC100257770 LOC18101152 LOC7489758 LOC25491020 LOC107948562 LOC107900225 LOC107931689 LOC106368654 LOC106415644 LOC102596946 LOC102601332 LOC102619744 LOC107775661 LOC107827358 LOC107821059
Function* U-box domain-containing protein 4 U-box domain-containing protein 4-like U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 RING/U-box superfamily protein with ARM repeat domain-containing protein U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4-like U-box domain-containing protein 4-like U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4-like U-box domain-containing protein 4-like U-box domain-containing protein 4-like U-box domain-containing protein 4 U-box domain-containing protein 4-like U-box domain-containing protein 4 U-box domain-containing protein 4-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 3
hvu01240 Biosynthesis of cofactors 3
hvu04626 Plant-pathogen interaction 2
hvu00040 Pentose and glucuronate interconversions 2
hvu00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 3
bdi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 3
zma04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 3
zma04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 4
sbi00051 Fructose and mannose metabolism 3
sbi00520 Amino sugar and nucleotide sugar metabolism 3
sbi01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00564 Glycerophospholipid metabolism 2
gma00592 alpha-Linolenic acid metabolism 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00510 N-Glycan biosynthesis 2
gma00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00564 Glycerophospholipid metabolism 3
sly00561 Glycerolipid metabolism 2
sly04070 Phosphatidylinositol signaling system 2
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 3
ppo04144 Endocytosis 3
ppo05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 2
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 4
nta00290 Valine, leucine and isoleucine biosynthesis 2
nta00660 C5-Branched dibasic acid metabolism 2
nta00966 Glucosinolate biosynthesis 2
nta01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 4
nta00270 Cysteine and methionine metabolism 2
nta00920 Sulfur metabolism 2
nta04122 Sulfur relay system 2
nta00290 Valine, leucine and isoleucine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123445660 123444734 123072795 123062801 123063637 100824267 100823278 4344480 103653150 103652393 100501378 8064368 816846 100813786 100794660 100811250 101244851 101265159 103842428 100257770 18101152 7489758 25491020 107948562 107900225 107931689 106368654 106415644 102596946 102601332 102619744 107775661 107827358 107821059
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