Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123452458   S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase 
 tae-r.2   123113472   S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase 
 tae-r.2   123105194   S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase 
 tae-r.2   123122993   S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase 
 bdi-r.1   100846034   uncharacterized LOC100846034 
 osa-u.5   4334285   S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase-like 
 zma-u.5   100273754   uncharacterized LOC100273754 
 ath-u.5   AT1G75200   flavodoxin family protein / radical SAM domain-containing protein 
 gma-u.5   100799430   S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase 
 gma-u.5   100791920   probable methyltransferase PMT28 
 sly-u.5   109120154   probable methyltransferase PMT26 
 bra-r.6   103830661   S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase 
 vvi-u.5   100255870   S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase 
 ppo-u.5   112326647   S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase 
 mtr-u.5   25482134   S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase 
 ghi-r.1   107922369   S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase 
 ghi-r.1   107917904   S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase 
 bna-r.1   106354510   S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase-like 
 bna-r.1   106353668   S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase 
 bna-r.1   106406196   S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase 
 sot-r.1   102581860   S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase 
 cit-r.1   102607821   S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase 
 nta-r.1   107805091   putative methyltransferase PMT28 
 nta-r.1   107774095   uncharacterized LOC107774095 
 cre-r.1   CHLRE_14g623300v5   uncharacterized protein 

close


Top 50 coexpressed genes to 123452458 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 123452458 (hvu-r.1 coexpression data)

CoexMap"123452458"


hvuLOC123452458 | Entrez gene ID : 123452458    
Species hvu tae bdi osa zma ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre sbi
Paralog 1 3 1 1 1 1 2 1 1 1 1 1 2 3 1 1 2 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031591 [list] [network] wybutosine biosynthetic process  (1 genes)  IEA  
GO CC
GO MF
GO:0051539 [list] [network] 4 iron, 4 sulfur cluster binding  (28 genes)  IEA  
GO:0010181 [list] [network] FMN binding  (45 genes)  IEA  
GO:0003824 [list] [network] catalytic activity  (9898 genes)  IEA  
Protein XP_044985044.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_044985044.1)
Subcellular
localization
TargetP
chlo 5  (predict for XP_044985044.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123452458
tae-r.2
for
123113472
tae-r.2
for
123105194
tae-r.2
for
123122993
bdi-r.1
for
100846034
osa-u.5
for
4334285
zma-u.5
for
100273754
ath-u.5
for
AT1G75200
gma-u.5
for
100799430
gma-u.5
for
100791920
sly-u.5
for
109120154
bra-r.6
for
103830661
vvi-u.5
for
100255870
ppo-u.5
for
112326647
mtr-u.5
for
25482134
ghi-r.1
for
107922369
ghi-r.1
for
107917904
bna-r.1
for
106354510
bna-r.1
for
106353668
bna-r.1
for
106406196
sot-r.1
for
102581860
cit-r.1
for
102607821
nta-r.1
for
107805091
nta-r.1
for
107774095
cre-r.1
for
CHLRE_14g623300v5


Ortholog ID: 9296
Species hvu tae tae tae bdi osa zma ath gma gma sly bra vvi ppo mtr ghi ghi bna bna bna sot cit nta nta cre
Symbol LOC123452458 LOC123113472 LOC123105194 LOC123122993 LOC100846034 LOC4334285 LOC100273754 AT1G75200 LOC100799430 LOC100791920 LOC109120154 LOC103830661 LOC100255870 LOC112326647 LOC25482134 LOC107922369 LOC107917904 LOC106354510 LOC106353668 LOC106406196 LOC102581860 LOC102607821 LOC107805091 LOC107774095 CHLRE_14g623300v5
Function* S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase uncharacterized LOC100846034 S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase-like uncharacterized LOC100273754 flavodoxin family protein / radical SAM domain-containing protein S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase probable methyltransferase PMT28 probable methyltransferase PMT26 S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase-like S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase putative methyltransferase PMT28 uncharacterized LOC107774095 uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00062 Fatty acid elongation 4
bdi01040 Biosynthesis of unsaturated fatty acids 4
bdi01212 Fatty acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
osa03040 Spliceosome 2
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 4
sly00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 2
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi00860 Porphyrin metabolism 2
ghi00900 Terpenoid backbone biosynthesis 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi00860 Porphyrin metabolism 2
ghi00900 Terpenoid backbone biosynthesis 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 5
bna03040 Spliceosome 4
bna03022 Basal transcription factors 2
bna03008 Ribosome biogenesis in eukaryotes 2
bna04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna03013 Nucleocytoplasmic transport 2
bna00061 Fatty acid biosynthesis 2
bna00780 Biotin metabolism 2
bna01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna03013 Nucleocytoplasmic transport 2
bna04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
cit04142 Lysosome 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 3
nta03040 Spliceosome 2
nta00040 Pentose and glucuronate interconversions 2
nta00052 Galactose metabolism 2
nta00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 4
nta00040 Pentose and glucuronate interconversions 2
nta00052 Galactose metabolism 2
nta00053 Ascorbate and aldarate metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123452458 123113472 123105194 123122993 100846034 4334285 100273754 843857 100799430 100791920 109120154 103830661 100255870 112326647 25482134 107922369 107917904 106354510 106353668 106406196 102581860 102607821 107805091 107774095 5718415
The preparation time of this page was 0.1 [sec].