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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   125574832   phospholipase D alpha 1-like 
 ath-u.5   PLDALPHA1   phospholipase D alpha 1 
 ath-u.5   PLDALPHA2   phospholipase D alpha 2 
 gma-u.5   100791688   phospholipase D alpha 1 
 gma-u.5   100784434   phospholipase D alpha 1 
 gma-u.5   100786410   phospholipase D alpha 1 
 vvi-u.5   100257647   phospholipase D alpha 1 
 vvi-u.5   PLD   phospholipase D alpha 
 ppo-u.5   7475119   phospholipase D alpha 1 
 ppo-u.5   18096711   phospholipase D alpha 1 
 mtr-u.5   11420371   phospholipase D alpha 1 
 mtr-u.5   11436615   phospholipase D alpha 1 
 mtr-u.5   11435279   phospholipase D alpha 1 
 sly-u.5   TPLD   phospholipase D alpha 
 sly-u.5   101264185   phospholipase D alpha 1-like 
 sly-u.5   PLDa2   phospholipase PLDa2 
 osa-u.5   4337942   phospholipase D alpha 1-like 
 osa-u.5   4327647   phospholipase D alpha 1-like 
 osa-u.5   4341469   phospholipase D alpha 2-like 
 zma-u.5   542702   phospholipase D 
 zma-u.5   100280155   phospholipase D family protein 
 zma-u.5   100279815   phospholipase D family protein 

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Top 50 coexpressed genes to 125574832 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 125574832 (bna-r.1 coexpression data)

CoexMap"125574832"


bnaLOC125574832 | Entrez gene ID : 125574832    
Species bna ath gma vvi ppo mtr sly osa zma bdi hvu bra cit sbi ghi sot nta cre tae
Paralog 1 2 3 2 2 3 3 3 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00564 [list] [network] Glycerophospholipid metabolism (347 genes)
bna00565 [list] [network] Ether lipid metabolism (87 genes)
bna04144 [list] [network] Endocytosis (511 genes)
GO BP
GO:0046470 [list] [network] phosphatidylcholine metabolic process  (67 genes)  IEA  
GO:0009395 [list] [network] phospholipid catabolic process  (68 genes)  IEA  
GO CC
GO:0005886 [list] [network] plasma membrane  (2955 genes)  IEA  
GO MF
GO:0004630 [list] [network] phospholipase D activity  (45 genes)  IEA  
GO:0005509 [list] [network] calcium ion binding  (766 genes)  IEA  
Protein XP_048627976.1 [sequence] [blastp]
XP_048627977.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  cysk 2,  cyto_pero 2,  chlo 1,  nucl 1  (predict for XP_048627976.1)
cyto 3,  nucl 2,  cyto_pero 2,  pero 1,  cysk_plas 1,  mito_plas 1  (predict for XP_048627977.1)
Subcellular
localization
TargetP
other 7,  scret 3  (predict for XP_048627976.1)
other 7  (predict for XP_048627977.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
125574832
ath-u.5
for
PLDALPHA1
ath-u.5
for
PLDALPHA2
gma-u.5
for
100791688
gma-u.5
for
100784434
gma-u.5
for
100786410
vvi-u.5
for
100257647
vvi-u.5
for
PLD
ppo-u.5
for
7475119
ppo-u.5
for
18096711
mtr-u.5
for
11420371
mtr-u.5
for
11436615
mtr-u.5
for
11435279
sly-u.5
for
TPLD
sly-u.5
for
101264185
sly-u.5
for
PLDa2
osa-u.5
for
4337942
osa-u.5
for
4327647
osa-u.5
for
4341469
zma-u.5
for
542702
zma-u.5
for
100280155
zma-u.5
for
100279815


Ortholog ID: 1270
Species bna bna bra ath ath ghi ghi cit cit gma gma vvi ppo mtr mtr sly sly sot sot nta nta osa osa zma zma tae tae hvu hvu sbi bdi bdi
Symbol LOC125609497 LOC106387492 LOC103840526 PLDALPHA1 PLDALPHA2 LOC107944262 LOC107937367 LOC102578017 LOC102621799 LOC100794115 LOC100784434 PLD LOC18096711 LOC11435279 LOC11436615 TPLD LOC101264185 LOC102588687 LOC102589221 LOC107772442 LOC107788090 LOC4337942 LOC4341469 LOC103630082 LOC100279815 LOC123163188 LOC123060546 LOC123397410 LOC123443052 LOC8065077 LOC100839982 LOC100822640
Function* phospholipase D alpha 2-like phospholipase D alpha 2 phospholipase D alpha 2 phospholipase D alpha 1 phospholipase D alpha 2 phospholipase D alpha 1 phospholipase D alpha 1 phospholipase D alpha phospholipase D alpha 1-like phospholipase D alpha 1 phospholipase D alpha 1 phospholipase D alpha phospholipase D alpha 1 phospholipase D alpha 1 phospholipase D alpha 1 phospholipase D alpha phospholipase D alpha 1-like phospholipase D alpha 1 phospholipase D alpha 1-like phospholipase D alpha 1-like phospholipase D alpha 1-like phospholipase D alpha 1-like phospholipase D alpha 2-like phospholipase D alpha 1 phospholipase D family protein phospholipase D alpha 2 phospholipase D alpha 1 phospholipase D alpha 1-like phospholipase D alpha 1 phospholipase D alpha 2 phospholipase D alpha 2 phospholipase D alpha 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00564 Glycerophospholipid metabolism 5
bna00565 Ether lipid metabolism 5
bna04144 Endocytosis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00564 Glycerophospholipid metabolism 5
bna00565 Ether lipid metabolism 5
bna04144 Endocytosis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00592 alpha-Linolenic acid metabolism 2
bra04144 Endocytosis 2
bra00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 2
ath03050 Proteasome 2
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 5
ghi00564 Glycerophospholipid metabolism 4
ghi00565 Ether lipid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 5
ghi00564 Glycerophospholipid metabolism 4
ghi00565 Ether lipid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00564 Glycerophospholipid metabolism 2
gma00565 Ether lipid metabolism 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00564 Glycerophospholipid metabolism 3
gma00565 Ether lipid metabolism 3
gma04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00562 Inositol phosphate metabolism 2
vvi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
ppo04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00564 Glycerophospholipid metabolism 5
mtr00565 Ether lipid metabolism 5
mtr04144 Endocytosis 3
mtr00592 alpha-Linolenic acid metabolism 3
mtr00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00051 Fructose and mannose metabolism 2
mtr00564 Glycerophospholipid metabolism 2
mtr00565 Ether lipid metabolism 2
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 3
sot00564 Glycerophospholipid metabolism 2
sot00565 Ether lipid metabolism 2
sot04144 Endocytosis 2
sot04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00564 Glycerophospholipid metabolism 2
sot00565 Ether lipid metabolism 2
sot04144 Endocytosis 2
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00564 Glycerophospholipid metabolism 6
nta00565 Ether lipid metabolism 4
nta04144 Endocytosis 4
nta00561 Glycerolipid metabolism 2
nta04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
nta00564 Glycerophospholipid metabolism 2
nta00565 Ether lipid metabolism 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00564 Glycerophospholipid metabolism 3
osa00565 Ether lipid metabolism 3
osa04144 Endocytosis 3
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04145 Phagosome 4
zma04517 IgSF CAM signaling 4
zma04814 Motor proteins 4
zma00564 Glycerophospholipid metabolism 2
zma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00564 Glycerophospholipid metabolism 3
tae00565 Ether lipid metabolism 3
tae04144 Endocytosis 3
tae00620 Pyruvate metabolism 3
tae00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00564 Glycerophospholipid metabolism 4
tae00565 Ether lipid metabolism 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 7
sbi04144 Endocytosis 6
sbi03040 Spliceosome 5
sbi04075 Plant hormone signal transduction 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 125609497 106387492 103840526 820816 841689 107944262 107937367 102578017 102621799 100794115 100784434 100232987 18096711 11435279 11436615 101257989 101264185 102588687 102589221 107772442 107788090 4337942 4341469 103630082 100279815 123163188 123060546 123397410 123443052 8065077 100839982 100822640
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