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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1  125578589  trihelix transcription factor GT-1-like 
 bna-r.1  111203342  trihelix transcription factor GT-4-like 
 bna-r.1  106376260  trihelix transcription factor GT-1 
 bna-r.1  106415412  trihelix transcription factor GT-1-like 
 bra-r.6  103843049  trihelix transcription factor GT-1 
 bra-r.6  117131705  trihelix transcription factor GT-4-like 
 ath-u.5  GT-1  Homeodomain-like superfamily protein 
 ghi-r.1  107928694  trihelix transcription factor GT-1 
 ghi-r.1  107946261  trihelix transcription factor GT-1 
 ghi-r.1  107921941  trihelix transcription factor GT-1 
 cit-r.1  102613983  trihelix transcription factor GT-1-like 
 gma-u.5  100809497  trihelix transcription factor GT-1 
 gma-u.5  100137074  GT-1 
 vvi-u.5  100265024  trihelix transcription factor GT-1 
 vvi-u.5  100264546  trihelix transcription factor GT-1 
 vvi-u.5  100249383  trihelix transcription factor GT-1 
 ppo-u.5  7477045  trihelix transcription factor GT-1 
 ppo-u.5  7494789  trihelix transcription factor GT-1 
 mtr-u.5  11440408  trihelix transcription factor GT-1 
 sly-u.5  101263196  trihelix transcription factor GT-1-like 
 sot-r.1  102602413  trihelix transcription factor GT-1 
 nta-r.1  107760506  trihelix transcription factor GT-4-like 
 nta-r.1  107764092  trihelix transcription factor GT-4 
 osa-u.5  4336214  trihelix transcription factor GT-4 
 zma-u.5  100280076  uncharacterized LOC100280076 
 tae-r.2  123053696  trihelix transcription factor GT-4 
 tae-r.2  123189575  trihelix transcription factor GT-1 
 tae-r.2  123045814  trihelix transcription factor GT-1 
 hvu-r.1  123427056  trihelix transcription factor GT-1-like 
 sbi-r.1  8060168  trihelix transcription factor GT-1 
 bdi-r.1  100829253  trihelix transcription factor GT-1 
 cre-r.1  CHLRE_03g151550v5  uncharacterized protein 
 cre-r.1  CHLRE_01g002950v5  uncharacterized protein 

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Top 50 coexpressed genes to 125578589 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 125578589 (bna-r.1 coexpression data)

CoexMap"125578589"


bnaLOC125578589 | Entrez gene ID : 125578589
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 1 3 1 2 3 2 1 1 1 2 1 1 3 1 1 1 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_048597722.1 [sequence] [blastp]
XP_048597723.1 [sequence] [blastp]
XP_048597724.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 1,  pero 1,  cyto_pero 1  (predict for XP_048597722.1)
nucl 4,  cyto 2,  cysk_nucl 2,  pero 1,  cyto_plas 1  (predict for XP_048597723.1)
nucl 4,  cyto 2,  cysk_nucl 2,  pero 1,  cyto_plas 1  (predict for XP_048597724.1)
Subcellular
localization
TargetP
other 9  (predict for XP_048597722.1)
other 9  (predict for XP_048597723.1)
other 9  (predict for XP_048597724.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

bna-r.1
for
125578589


bna-r.1
for
111203342


bna-r.1
for
106376260


bna-r.1
for
106415412


bra-r.6
for
103843049


bra-r.6
for
117131705


ath-u.5
for
GT-1


ghi-r.1
for
107928694


ghi-r.1
for
107946261


ghi-r.1
for
107921941


cit-r.1
for
102613983


gma-u.5
for
100809497


gma-u.5
for
100137074


vvi-u.5
for
100265024


vvi-u.5
for
100264546


vvi-u.5
for
100249383


ppo-u.5
for
7477045


ppo-u.5
for
7494789


mtr-u.5
for
11440408


sly-u.5
for
101263196


sot-r.1
for
102602413


nta-r.1
for
107760506


nta-r.1
for
107764092


osa-u.5
for
4336214


zma-u.5
for
100280076


tae-r.2
for
123053696


tae-r.2
for
123189575


tae-r.2
for
123045814


hvu-r.1
for
123427056


sbi-r.1
for
8060168


bdi-r.1
for
100829253


cre-r.1
for
CHLRE_03g151550v5


cre-r.1
for
CHLRE_01g002950v5



Ortholog ID: 4736
Species bna bna bna bra bra ath ghi ghi ghi cit gma gma vvi vvi vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre cre
Symbol LOC111203342 LOC106376260 LOC106415412 LOC117131705 LOC103854392 GT-1 LOC107946261 LOC107921941 LOC107916618 LOC102613983 LOC100809497 LOC100137074 LOC100265024 LOC100264546 LOC100249383 LOC7477045 LOC7494789 LOC11440408 LOC101263196 LOC102602413 LOC107760506 LOC107764092 LOC4336214 LOC100280076 LOC123053696 LOC123189575 LOC123045814 LOC123427056 LOC8060168 LOC100829253 CHLRE_03g151550v5 CHLRE_01g002950v5
Function* trihelix transcription factor GT-4-like trihelix transcription factor GT-1 trihelix transcription factor GT-1-like trihelix transcription factor GT-4-like trihelix transcription factor GT-4 Homeodomain-like superfamily protein trihelix transcription factor GT-1 trihelix transcription factor GT-1 trihelix transcription factor GT-1 trihelix transcription factor GT-1-like trihelix transcription factor GT-1 GT-1 trihelix transcription factor GT-1 trihelix transcription factor GT-1 trihelix transcription factor GT-1 trihelix transcription factor GT-1 trihelix transcription factor GT-1 trihelix transcription factor GT-1 trihelix transcription factor GT-1-like trihelix transcription factor GT-1 trihelix transcription factor GT-4-like trihelix transcription factor GT-4 trihelix transcription factor GT-4 uncharacterized LOC100280076 trihelix transcription factor GT-4 trihelix transcription factor GT-1 trihelix transcription factor GT-1 trihelix transcription factor GT-1-like trihelix transcription factor GT-1 trihelix transcription factor GT-1 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 5
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03060 Protein export 2
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 2
cit04075 Plant hormone signal transduction 2
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 3
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 4
sly03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 4
tae00760 Nicotinate and nicotinamide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00760 Nicotinate and nicotinamide metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 4
tae00760 Nicotinate and nicotinamide metabolism 3
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 3
sbi03410 Base excision repair 3
sbi03420 Nucleotide excision repair 3
sbi03430 Mismatch repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 2
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 4
cre00260 Glycine, serine and threonine metabolism 3
cre01200 Carbon metabolism 3
cre01240 Biosynthesis of cofactors 3
cre00270 Cysteine and methionine metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 111203342 106376260 106415412 117131705 103854392 837905 107946261 107921941 107916618 102613983 100809497 100137074 100265024 100264546 100249383 7477045 7494789 11440408 101263196 102602413 107760506 107764092 4336214 100280076 123053696 123189575 123045814 123427056 8060168 100829253 5721126 66051908
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