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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   125580423   uncharacterized LOC125580423 
 ath-u.5   AT3G08020   PHD finger family protein 
 ath-u.5   AT3G52100   RING/FYVE/PHD-type zinc finger family protein 
 gma-u.5   100809429   uncharacterized LOC100809429 
 gma-u.5   100815407   uncharacterized LOC100815407 
 vvi-u.5   100249974   uncharacterized LOC100249974 
 ppo-u.5   7467338   uncharacterized LOC7467338 
 ppo-u.5   7467337   uncharacterized LOC7467337 
 ppo-u.5   7480071   uncharacterized LOC7480071 
 mtr-u.5   25491967   uncharacterized LOC25491967 
 sly-u.5   101264566   uncharacterized LOC101264566 
 sly-u.5   101249401   uncharacterized LOC101249401 
 osa-u.5   4352386   uncharacterized LOC4352386 
 zma-u.5   103650588   uncharacterized LOC103650588 
 zma-u.5   103640978   uncharacterized LOC103640978 

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Top 50 coexpressed genes to 125580423 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 125580423 (bna-r.1 coexpression data)

CoexMap"125580423"


bnaLOC125580423 | Entrez gene ID : 125580423    
Species bna ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae ghi
Paralog 1 2 2 1 3 1 2 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (509 genes)  IEA  
GO CC
GO:0044666 [list] [network] MLL3/4 complex  (2 genes)  IEA  
GO MF
GO:0042800 [list] [network] histone H3K4 methyltransferase activity  (4 genes)  IEA  
GO:0003713 [list] [network] transcription coactivator activity  (127 genes)  IEA  
GO:0042393 [list] [network] histone binding  (165 genes)  IEA  
Protein XP_048600790.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  mito 1,  chlo 1,  cysk 1,  cyto_mito 1,  mito_plas 1  (predict for XP_048600790.1)
Subcellular
localization
TargetP
mito 3  (predict for XP_048600790.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
125580423

.
ath-u.5
for
AT3G08020

.
ath-u.5
for
AT3G52100

.
gma-u.5
for
100809429

.
gma-u.5
for
100815407

.
vvi-u.5
for
100249974

.
ppo-u.5
for
7467338

.
ppo-u.5
for
7467337

.
ppo-u.5
for
7480071

.
mtr-u.5
for
25491967

.
sly-u.5
for
101264566

.
sly-u.5
for
101249401

.
osa-u.5
for
4352386

.
zma-u.5
for
103650588

.
zma-u.5
for
103640978

.


Ortholog ID: 5502
Species ath ath gma gma sly osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT3G08020 AT3G52100 LOC100815407 LOC100809429 LOC101249121 LOC4352386 LOC103650588 LOC103640978 LOC103841144 LOC103848909 LOC100249974 LOC7480071 LOC7467337 LOC25491967 LOC123110853 LOC123102669 LOC123399936 LOC107926304 LOC107938345 LOC106427965 LOC106402649 LOC8064619 LOC102586916 LOC102612789 LOC100821635 LOC107785682 LOC107830271
Function* PHD finger family protein RING/FYVE/PHD-type zinc finger family protein uncharacterized LOC100815407 uncharacterized LOC100809429 uncharacterized LOC101249121 uncharacterized LOC4352386 uncharacterized LOC103650588 uncharacterized LOC103640978 histone-lysine N-methyltransferase 2C histone-lysine N-methyltransferase 2C uncharacterized LOC100249974 uncharacterized LOC7480071 uncharacterized LOC7467337 uncharacterized LOC25491967 uncharacterized LOC123110853 uncharacterized LOC123102669 uncharacterized LOC123399936 uncharacterized LOC107926304 uncharacterized LOC107938345 histone-lysine N-methyltransferase 2C histone-lysine N-methyltransferase 2C uncharacterized LOC8064619 histone-lysine N-methyltransferase 2C-like uncharacterized LOC102612789 uncharacterized LOC100821635 uncharacterized LOC107785682 uncharacterized LOC107830271
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00562 Inositol phosphate metabolism 2
gma04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
bra03040 Spliceosome 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
sot03013 Nucleocytoplasmic transport 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819993 824373 100815407 100809429 101249121 4352386 103650588 103640978 103841144 103848909 100249974 7480071 7467337 25491967 123110853 123102669 123399936 107926304 107938345 106427965 106402649 8064619 102586916 102612789 100821635 107785682 107830271
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