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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G52100   RING/FYVE/PHD-type zinc finger family protein 
 ath-r.7   AT3G52100   RING/FYVE/PHD-type zinc finger family protein 
 ath-e.2   AT3G52100   RING/FYVE/PHD-type zinc finger family protein 
 ath-u.5   AT3G08020   PHD finger family protein 
 gma-u.5   100809429   uncharacterized LOC100809429 
 gma-u.5   100815407   uncharacterized LOC100815407 
 vvi-u.5   100249974   uncharacterized LOC100249974 
 ppo-u.5   7467338   uncharacterized LOC7467338 
 ppo-u.5   7467337   uncharacterized LOC7467337 
 ppo-u.5   7480071   uncharacterized LOC7480071 
 mtr-u.5   25491967   uncharacterized LOC25491967 
 sly-u.5   101249401   uncharacterized LOC101249401 
 sly-u.5   101249121   uncharacterized LOC101249121 
 osa-u.5   4352386   uncharacterized LOC4352386 
 zma-u.5   103650588   uncharacterized LOC103650588 
 zma-u.5   103640978   uncharacterized LOC103640978 

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Top 50 coexpressed genes to AT3G52100 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G52100 (ath-u.5 coexpression data)

CoexMap"824373"


athAT3G52100 | Entrez gene ID : 824373      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 4 2 1 3 1 2 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009506 [list] [network] plasmodesma  (874 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001327259.1 [sequence] [blastp]
NP_001327260.1 [sequence] [blastp]
NP_001327261.1 [sequence] [blastp]
NP_190778.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  chlo 3,  nucl_plas 3  (predict for NP_001327259.1)
nucl 4,  chlo 3,  cyto_nucl 3  (predict for NP_001327260.1)
nucl 9  (predict for NP_001327261.1)
nucl 4,  chlo 3,  cyto_nucl 3  (predict for NP_190778.2)
Subcellular
localization
TargetP
scret 3  (predict for NP_001327259.1)
scret 3  (predict for NP_001327260.1)
other 5,  scret 3  (predict for NP_001327261.1)
scret 3  (predict for NP_190778.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G52100
ath-r.7
for
AT3G52100
ath-e.2
for
AT3G52100
ath-u.5
for
AT3G08020
gma-u.5
for
100809429
gma-u.5
for
100815407
vvi-u.5
for
100249974
ppo-u.5
for
7467338
ppo-u.5
for
7467337
ppo-u.5
for
7480071
mtr-u.5
for
25491967
sly-u.5
for
101249401
sly-u.5
for
101249121
osa-u.5
for
4352386
zma-u.5
for
103650588
zma-u.5
for
103640978


Ortholog ID: 5502
Species ath ath bra bra bna bna ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma zma tae tae hvu sbi bdi
Symbol AT3G08020 AT3G52100 LOC103841144 LOC103848909 LOC106427965 LOC106402649 LOC107926304 LOC107938345 LOC102612789 LOC100815407 LOC100809429 LOC100249974 LOC7480071 LOC7467337 LOC25491967 LOC101249121 LOC102586916 LOC107785682 LOC107830271 LOC4352386 LOC103650588 LOC103640978 LOC123110853 LOC123102669 LOC123399936 LOC8064619 LOC100821635
Function* PHD finger family protein RING/FYVE/PHD-type zinc finger family protein histone-lysine N-methyltransferase 2C histone-lysine N-methyltransferase 2C histone-lysine N-methyltransferase 2C histone-lysine N-methyltransferase 2C uncharacterized LOC107926304 uncharacterized LOC107938345 uncharacterized LOC102612789 uncharacterized LOC100815407 uncharacterized LOC100809429 uncharacterized LOC100249974 uncharacterized LOC7480071 uncharacterized LOC7467337 uncharacterized LOC25491967 uncharacterized LOC101249121 histone-lysine N-methyltransferase 2C-like uncharacterized LOC107785682 uncharacterized LOC107830271 uncharacterized LOC4352386 uncharacterized LOC103650588 uncharacterized LOC103640978 uncharacterized LOC123110853 uncharacterized LOC123102669 uncharacterized LOC123399936 uncharacterized LOC8064619 uncharacterized LOC100821635
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
bra03040 Spliceosome 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00562 Inositol phosphate metabolism 2
gma04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
sot03013 Nucleocytoplasmic transport 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819993 824373 103841144 103848909 106427965 106402649 107926304 107938345 102612789 100815407 100809429 100249974 7480071 7467337 25491967 101249121 102586916 107785682 107830271 4352386 103650588 103640978 123110853 123102669 123399936 8064619 100821635
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