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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   125586218   D-glycerate 3-kinase, chloroplastic-like 
 ath-u.5   AT1G80380   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 gma-u.5   100806896   D-glycerate 3-kinase, chloroplastic-like 
 gma-u.5   100820573   D-glycerate 3-kinase, chloroplastic 
 vvi-u.5   100253144   D-glycerate 3-kinase, chloroplastic 
 ppo-u.5   18096853   D-glycerate 3-kinase, chloroplastic 
 ppo-u.5   7490980   D-glycerate 3-kinase, chloroplastic 
 mtr-u.5   11436362   D-glycerate 3-kinase, chloroplastic 
 sly-u.5   101244755   D-glycerate 3-kinase, chloroplastic 
 osa-u.5   4324401   D-glycerate 3-kinase, chloroplastic 
 zma-u.5   103651345   D-glycerate 3-kinase, chloroplastic-like 
 zma-u.5   100274052   uncharacterized LOC100274052 

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Top 50 coexpressed genes to 125586218 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 125586218 (bna-r.1 coexpression data)

CoexMap"125586218"


bnaLOC125586218 | Entrez gene ID : 125586218    
Species bna ath gma vvi ppo mtr sly osa zma bdi hvu bra cit sbi ghi sot nta cre tae
Paralog 1 1 2 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00260 [list] [network] Glycine, serine and threonine metabolism (223 genes)
bna00561 [list] [network] Glycerolipid metabolism (242 genes)
bna00630 [list] [network] Glyoxylate and dicarboxylate metabolism (260 genes)
bna01200 [list] [network] Carbon metabolism (888 genes)
GO BP
GO:0009853 [list] [network] photorespiration  (15 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (16489 genes)  IEA  
GO MF
Protein XP_048612020.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_048612020.1)
Subcellular
localization
TargetP
chlo 3  (predict for XP_048612020.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
125586218
ath-u.5
for
AT1G80380
gma-u.5
for
100806896
gma-u.5
for
100820573
vvi-u.5
for
100253144
ppo-u.5
for
18096853
ppo-u.5
for
7490980
mtr-u.5
for
11436362
sly-u.5
for
101244755
osa-u.5
for
4324401
zma-u.5
for
103651345
zma-u.5
for
100274052


Ortholog ID: 5639
Species bna bna bra bra ath ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma zma tae tae hvu sbi sbi bdi cre
Symbol LOC106398485 LOC125586218 LOC103830434 LOC103832491 AT1G80380 LOC107949570 LOC107940949 LOC102631190 LOC100820573 LOC100806896 LOC100253144 LOC7490980 LOC18096853 LOC11436362 LOC101244755 LOC102598451 LOC107815070 LOC107763687 LOC4324401 LOC103651345 LOC100274052 LOC123078962 LOC123070552 LOC123444126 LOC8066598 LOC8061877 LOC100840924 CHLRE_12g542300v5
Function* D-glycerate 3-kinase, chloroplastic D-glycerate 3-kinase, chloroplastic-like D-glycerate 3-kinase, chloroplastic D-glycerate 3-kinase, chloroplastic-like P-loop containing nucleoside triphosphate hydrolases superfamily protein D-glycerate 3-kinase, chloroplastic D-glycerate 3-kinase, chloroplastic D-glycerate 3-kinase, chloroplastic D-glycerate 3-kinase, chloroplastic D-glycerate 3-kinase, chloroplastic-like D-glycerate 3-kinase, chloroplastic D-glycerate 3-kinase, chloroplastic D-glycerate 3-kinase, chloroplastic D-glycerate 3-kinase, chloroplastic D-glycerate 3-kinase, chloroplastic D-glycerate 3-kinase, chloroplastic D-glycerate 3-kinase, chloroplastic D-glycerate 3-kinase, chloroplastic-like D-glycerate 3-kinase, chloroplastic D-glycerate 3-kinase, chloroplastic-like uncharacterized LOC100274052 D-glycerate 3-kinase, chloroplastic D-glycerate 3-kinase, chloroplastic D-glycerate 3-kinase, chloroplastic D-glycerate 3-kinase, chloroplastic D-glycerate 3-kinase, chloroplastic D-glycerate 3-kinase, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 7
bna00561 Glycerolipid metabolism 7
bna00630 Glyoxylate and dicarboxylate metabolism 7
bna01200 Carbon metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 7
bna00561 Glycerolipid metabolism 7
bna00630 Glyoxylate and dicarboxylate metabolism 7
bna01200 Carbon metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00630 Glyoxylate and dicarboxylate metabolism 3
bra01200 Carbon metabolism 3
bra00260 Glycine, serine and threonine metabolism 2
bra04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 6
bra00710 Carbon fixation by Calvin cycle 3
bra00630 Glyoxylate and dicarboxylate metabolism 3
bra00030 Pentose phosphate pathway 2
bra00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00280 Valine, leucine and isoleucine degradation 7
ath01210 2-Oxocarboxylic acid metabolism 5
ath01200 Carbon metabolism 5
ath00640 Propanoate metabolism 4
ath00785 Lipoic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 7
ghi00260 Glycine, serine and threonine metabolism 6
ghi00630 Glyoxylate and dicarboxylate metabolism 6
ghi00860 Porphyrin metabolism 4
ghi01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00760 Nicotinate and nicotinamide metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi00270 Cysteine and methionine metabolism 2
ghi00380 Tryptophan metabolism 2
ghi00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 3
gma00500 Starch and sucrose metabolism 2
gma00230 Purine metabolism 2
gma00260 Glycine, serine and threonine metabolism 2
gma00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00260 Glycine, serine and threonine metabolism 2
gma00561 Glycerolipid metabolism 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 7
vvi00710 Carbon fixation by Calvin cycle 4
vvi00630 Glyoxylate and dicarboxylate metabolism 3
vvi00195 Photosynthesis 2
vvi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 7
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
mtr01240 Biosynthesis of cofactors 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 3
sly00030 Pentose phosphate pathway 2
sly00710 Carbon fixation by Calvin cycle 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 7
sot00710 Carbon fixation by Calvin cycle 6
sot01230 Biosynthesis of amino acids 5
sot00010 Glycolysis / Gluconeogenesis 4
sot00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
nta00500 Starch and sucrose metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
nta00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta00500 Starch and sucrose metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
nta00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 8
osa00710 Carbon fixation by Calvin cycle 5
osa00630 Glyoxylate and dicarboxylate metabolism 5
osa01230 Biosynthesis of amino acids 3
osa00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 4
zma00630 Glyoxylate and dicarboxylate metabolism 3
zma00620 Pyruvate metabolism 3
zma00710 Carbon fixation by Calvin cycle 3
zma00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 6
zma01200 Carbon metabolism 3
zma00260 Glycine, serine and threonine metabolism 2
zma00630 Glyoxylate and dicarboxylate metabolism 2
zma00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 9
tae00630 Glyoxylate and dicarboxylate metabolism 8
tae00710 Carbon fixation by Calvin cycle 6
tae00260 Glycine, serine and threonine metabolism 5
tae00020 Citrate cycle (TCA cycle) 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 9
tae01200 Carbon metabolism 9
tae00710 Carbon fixation by Calvin cycle 6
tae00260 Glycine, serine and threonine metabolism 6
tae00020 Citrate cycle (TCA cycle) 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 2
sbi00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 5
bdi00630 Glyoxylate and dicarboxylate metabolism 5
bdi00710 Carbon fixation by Calvin cycle 2
bdi01230 Biosynthesis of amino acids 2
bdi00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00630 Glyoxylate and dicarboxylate metabolism 5
cre01200 Carbon metabolism 5
cre00260 Glycine, serine and threonine metabolism 4
cre00250 Alanine, aspartate and glutamate metabolism 2
cre01210 2-Oxocarboxylic acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106398485 125586218 103830434 103832491 844378 107949570 107940949 102631190 100820573 100806896 100253144 7490980 18096853 11436362 101244755 102598451 107815070 107763687 4324401 103651345 100274052 123078962 123070552 123444126 8066598 8061877 100840924 5719520
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