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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   125587925   syncoilin-like 
 ath-u.5   AT2G27740   RAB6-interacting golgin (DUF662) 
 ath-u.5   AT2G36410   transcriptional activator (DUF662) 
 ath-u.5   AT3G09980   ankyrin repeat 30A-like protein (DUF662) 
 gma-u.5   100499699   uncharacterized LOC100499699 
 gma-u.5   100527015   uncharacterized LOC100527015 
 gma-u.5   100796368   uncharacterized LOC100796368 
 vvi-u.5   100256294   uncharacterized LOC100256294 
 vvi-u.5   100243168   uncharacterized LOC100243168 
 ppo-u.5   18097972   uncharacterized LOC18097972 
 ppo-u.5   18100064   uncharacterized LOC18100064 
 ppo-u.5   7478628   uncharacterized LOC7478628 
 mtr-u.5   25487528   E3 ubiquitin-protein ligase BRE1A 
 mtr-u.5   11421495   uncharacterized LOC11421495 
 sly-u.5   101249789   uncharacterized LOC101249789 
 sly-u.5   101262159   uncharacterized LOC101262159 
 sly-u.5   101267639   uncharacterized LOC101267639 
 osa-u.5   4329531   uncharacterized LOC4329531 
 osa-u.5   4335760   uncharacterized LOC4335760 
 zma-u.5   100277929   uncharacterized LOC100277929 
 zma-u.5   100277048   uncharacterized LOC100277048 

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Top 50 coexpressed genes to 125587925 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 125587925 (bna-r.1 coexpression data)

CoexMap"125587925"


bnaLOC125587925 | Entrez gene ID : 125587925    
Species bna ath gma vvi ppo mtr sly osa zma tae hvu ghi bdi cit bra cre sbi nta sot
Paralog 1 3 3 2 3 2 3 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_048615273.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_048615273.1)
Subcellular
localization
TargetP
chlo 4  (predict for XP_048615273.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
125587925

.
ath-u.5
for
AT2G27740

.
ath-u.5
for
AT2G36410

.
ath-u.5
for
AT3G09980

.
gma-u.5
for
100499699

.
gma-u.5
for
100527015

.
gma-u.5
for
100796368

.
vvi-u.5
for
100256294

.
vvi-u.5
for
100243168

.
ppo-u.5
for
18097972

.
ppo-u.5
for
18100064

.
ppo-u.5
for
7478628

.
mtr-u.5
for
25487528

.
mtr-u.5
for
11421495

.
sly-u.5
for
101249789

.
sly-u.5
for
101262159

.
sly-u.5
for
101267639

.
osa-u.5
for
4329531

.
osa-u.5
for
4335760

.
zma-u.5
for
100277929

.
zma-u.5
for
100277048

.


Ortholog ID: 1099
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT5G03660 AT2G36410 LOC100527015 LOC100796368 LOC101262159 LOC101267639 LOC4329531 LOC4335760 LOC100277048 LOC100277929 LOC103870498 LOC117132589 LOC100256294 LOC100243168 LOC18097972 LOC18100064 LOC11421495 LOC25487528 LOC123045382 LOC123185455 LOC123426637 LOC121220864 LOC107908710 LOC106437898 LOC106439182 LOC8059620 LOC8072955 LOC102594562 LOC102599315 LOC102614802 LOC102615518 LOC100841661 LOC100830167 LOC107813131 LOC107799819
Function* transcriptional activator (DUF662) transcriptional activator (DUF662) uncharacterized LOC100527015 uncharacterized LOC100796368 uncharacterized LOC101262159 uncharacterized LOC101267639 uncharacterized LOC4329531 uncharacterized LOC4335760 uncharacterized LOC100277048 uncharacterized LOC100277929 syncoilin E3 ubiquitin-protein ligase BRE1A-like uncharacterized LOC100256294 uncharacterized LOC100243168 uncharacterized LOC18097972 uncharacterized LOC18100064 uncharacterized LOC11421495 E3 ubiquitin-protein ligase BRE1A uncharacterized LOC123045382 uncharacterized LOC123185455 uncharacterized LOC123426637 probable DNA double-strand break repair Rad50 ATPase probable DNA double-strand break repair Rad50 ATPase uncharacterized LOC106437898 syncoilin uncharacterized LOC8059620 uncharacterized LOC8072955 uncharacterized LOC102594562 uncharacterized LOC102599315 uncharacterized LOC102614802 uncharacterized LOC102615518 uncharacterized LOC100841661 uncharacterized LOC100830167 uncharacterized LOC107813131 uncharacterized LOC107799819
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 2
ath04070 Phosphatidylinositol signaling system 2
ath04075 Plant hormone signal transduction 2
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04145 Phagosome 2
gma04148 Efferocytosis 2
gma04517 IgSF CAM signaling 2
gma04518 Integrin signaling 2
gma04620 Toll-like receptor signaling pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03410 Base excision repair 2
zma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 7
bra00360 Phenylalanine metabolism 3
bra00941 Flavonoid biosynthesis 3
bra00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03410 Base excision repair 2
hvu00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 3
bna00030 Pentose phosphate pathway 3
bna00051 Fructose and mannose metabolism 3
bna00052 Galactose metabolism 3
bna01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 6
sot00941 Flavonoid biosynthesis 3
sot00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 3
sot00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi02010 ABC transporters 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831768 818215 100527015 100796368 101262159 101267639 4329531 4335760 100277048 100277929 103870498 117132589 100256294 100243168 18097972 18100064 11421495 25487528 123045382 123185455 123426637 121220864 107908710 106437898 106439182 8059620 8072955 102594562 102599315 102614802 102615518 100841661 100830167 107813131 107799819
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