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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1  125591799  probable transcription factor At1g61730 
 bna-r.1  125591770  probable transcription factor At1g61730 
 bna-r.1  125592499  probable transcription factor At1g61730 
 bna-r.1  125597914  probable transcription factor At1g61730 
 bra-r.6  103848165  probable transcription factor At1g61730 
 bra-r.6  103849644  probable transcription factor At1g11510 
 bra-r.6  103831052  probable transcription factor At1g61730 
 ghi-r.1  107936159  GLABROUS1 enhancer-binding protein-like 
 ghi-r.1  107932671  mediator-associated protein 1-like 
 ghi-r.1  107896271  probable transcription factor At1g61730 
 cit-r.1  102620034  probable transcription factor At1g11510 
 cit-r.1  102610695  probable transcription factor At1g11510 
 gma-u.5  100791520  STOREKEEPER protein 
 gma-u.5  100782985  GLABROUS1 enhancer-binding protein-like 
 vvi-u.5  100854363  STOREKEEPER protein 
 ppo-u.5  7478738  GLABROUS1 enhancer-binding protein-like 
 ppo-u.5  7478657  GLABROUS1 enhancer-binding protein-like 
 mtr-u.5  11424230  probable transcription factor At4g00390 
 mtr-u.5  11409742  GLABROUS1 enhancer-binding protein-like 
 sly-u.5  101263019  GLABROUS1 enhancer-binding protein-like 
 sot-r.1  102584580  mediator-associated protein 1-like 
 nta-r.1  107826502  putative transcription factor At1g61730 
 nta-r.1  107795200  GLABROUS1 enhancer-binding protein-like 

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Top 50 coexpressed genes to 125591799 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 125591799 (bna-r.1 coexpression data)

CoexMap"125591799"


bnaLOC125591799 | Entrez gene ID : 125591799
Species bna bra ghi cit gma vvi ppo mtr sly sot nta zma cre sbi ath tae osa hvu bdi
Paralog 4 3 3 2 2 1 2 2 1 1 2 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (5322 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
Protein XP_048622611.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  mito 1,  plas 1,  mito_plas 1  (predict for XP_048622611.1)
Subcellular
localization
TargetP
other 8  (predict for XP_048622611.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

bna-r.1
for
125591799


bna-r.1
for
125591770


bna-r.1
for
125592499


bna-r.1
for
125597914


bra-r.6
for
103848165


bra-r.6
for
103849644


bra-r.6
for
103831052


ghi-r.1
for
107936159


ghi-r.1
for
107932671


ghi-r.1
for
107896271


cit-r.1
for
102620034


cit-r.1
for
102610695


gma-u.5
for
100791520


gma-u.5
for
100782985


vvi-u.5
for
100854363


ppo-u.5
for
7478738


ppo-u.5
for
7478657


mtr-u.5
for
11424230


mtr-u.5
for
11409742


sly-u.5
for
101263019


sot-r.1
for
102584580


nta-r.1
for
107826502


nta-r.1
for
107795200



Ortholog ID: 2008
Species bna bna bna bra bra bra ath ath ath ghi ghi ghi cit cit gma gma vvi ppo ppo mtr mtr sly sot nta nta
Symbol LOC106420244 LOC125603611 LOC106348832 LOC103831052 LOC103863621 LOC103864145 AT1G11510 AT4G00390 AT4G00238 LOC107936159 LOC107915721 LOC107929621 LOC102620034 LOC102610695 LOC100791520 LOC100782985 LOC100854363 LOC7478738 LOC7478657 LOC11424230 LOC11409742 LOC101263019 LOC102584580 LOC107826502 LOC107795200
Function* probable transcription factor At1g61730 probable transcription factor At1g61730 probable transcription factor At1g61730 probable transcription factor At1g61730 probable transcription factor At1g61730 probable transcription factor At1g11510 DNA-binding storekeeper protein-related transcriptional regulator DNA-binding storekeeper protein-related transcriptional regulator DNA-binding storekeeper protein-related transcriptional regulator GLABROUS1 enhancer-binding protein-like probable transcription factor At1g61730 probable transcription factor At1g11510 probable transcription factor At1g11510 probable transcription factor At1g11510 STOREKEEPER protein GLABROUS1 enhancer-binding protein-like STOREKEEPER protein GLABROUS1 enhancer-binding protein-like GLABROUS1 enhancer-binding protein-like probable transcription factor At4g00390 GLABROUS1 enhancer-binding protein-like GLABROUS1 enhancer-binding protein-like mediator-associated protein 1-like putative transcription factor At1g61730 GLABROUS1 enhancer-binding protein-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 3
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 3
cit00290 Valine, leucine and isoleucine biosynthesis 2
cit00770 Pantothenate and CoA biosynthesis 2
cit01210 2-Oxocarboxylic acid metabolism 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106420244 125603611 106348832 103831052 103863621 103864145 837694 828200 825892 107936159 107915721 107929621 102620034 102610695 100791520 100782985 100854363 7478738 7478657 11424230 11409742 101263019 102584580 107826502 107795200
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