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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   125609470   transcription initiation factor TFIID subunit 7-like 
 bna-r.1   125601968   transcription initiation factor TFIID subunit 7-like 
 bna-r.1   125601103   transcription initiation factor TFIID subunit 7-like 
 bna-r.1   106404518   transcription initiation factor TFIID subunit 7 
 bra-r.6   103829794   transcription initiation factor TFIID subunit 7 
 bra-r.6   103871047   transcription initiation factor TFIID subunit 7 
 ath-u.5   TAF7   TBP-associated factor 7 
 ghi-r.1   107938391   transcription initiation factor TFIID subunit 7 
 ghi-r.1   121220148   transcription initiation factor TFIID subunit 7 
 cit-r.1   102614199   transcription initiation factor TFIID subunit 7 
 gma-u.5   100810740   transcription initiation factor TFIID subunit 7 
 gma-u.5   100806004   transcription initiation factor TFIID subunit 7-like 
 gma-u.5   100782843   transcription initiation factor TFIID subunit 7-like 
 vvi-u.5   100258782   transcription initiation factor TFIID subunit 7 
 ppo-u.5   7463581   transcription initiation factor TFIID subunit 7 
 ppo-u.5   7457707   transcription initiation factor TFIID subunit 7 
 mtr-u.5   11433231   transcription initiation factor TFIID subunit 7 
 sly-u.5   101261021   transcription initiation factor TFIID subunit 7 
 sot-r.1   107057648   transcription initiation factor TFIID subunit 7-like 
 sot-r.1   102594176   transcription initiation factor TFIID subunit 7-like 
 nta-r.1   107808629   transcription initiation factor TFIID subunit 7 
 nta-r.1   107774462   transcription initiation factor TFIID subunit 7 
 osa-u.5   4338489   transcription initiation factor TFIID subunit 7 
 zma-u.5   103627946   transcription initiation factor TFIID subunit 7 
 zma-u.5   103640335   transcription initiation factor TFIID subunit 7 
 zma-u.5   103644121   transcription initiation factor TFIID subunit 7 
 tae-r.2   123074579   transcription initiation factor TFIID subunit 7 
 tae-r.2   123148992   uncharacterized LOC123148992 
 tae-r.2   123061599   uncharacterized LOC123061599 
 hvu-r.1   123409804   transcription initiation factor TFIID subunit 7-like 
 hvu-r.1   123443979   transcription initiation factor TFIID subunit 7-like 
 sbi-r.1   8077195   transcription initiation factor TFIID subunit 7 
 sbi-r.1   8054955   transcription initiation factor TFIID subunit 7 
 bdi-r.1   100831039   transcription initiation factor TFIID subunit 7 
 cre-r.1   CHLRE_01g011200v5   uncharacterized protein 

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Top 50 coexpressed genes to 125609470 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 125609470 (bna-r.1 coexpression data)

CoexMap"125609470"


bnaLOC125609470 | Entrez gene ID : 125609470    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 1 2 1 3 1 2 1 1 2 2 1 3 3 2 2 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03022 [list] [network] Basal transcription factors (161 genes)
GO BP
GO:0051123 [list] [network] RNA polymerase II preinitiation complex assembly  (34 genes)  IEA  
GO:0006367 [list] [network] transcription initiation at RNA polymerase II promoter  (114 genes)  IEA  
GO CC
GO:0005669 [list] [network] transcription factor TFIID complex  (56 genes)  IEA  
GO MF
GO:0016251 [list] [network] RNA polymerase II general transcription initiation factor activity  (57 genes)  IEA  
Protein XP_048636894.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_048636894.1)
Subcellular
localization
TargetP
other 7  (predict for XP_048636894.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
125609470
bna-r.1
for
125601968
bna-r.1
for
125601103
bna-r.1
for
106404518
bra-r.6
for
103829794
bra-r.6
for
103871047
ath-u.5
for
TAF7
ghi-r.1
for
107938391
ghi-r.1
for
121220148
cit-r.1
for
102614199
gma-u.5
for
100810740
gma-u.5
for
100806004
gma-u.5
for
100782843
vvi-u.5
for
100258782
ppo-u.5
for
7463581
ppo-u.5
for
7457707
mtr-u.5
for
11433231
sly-u.5
for
101261021
sot-r.1
for
107057648
sot-r.1
for
102594176
nta-r.1
for
107808629
nta-r.1
for
107774462
osa-u.5
for
4338489
zma-u.5
for
103627946
zma-u.5
for
103640335
zma-u.5
for
103644121
tae-r.2
for
123074579
tae-r.2
for
123148992
tae-r.2
for
123061599
hvu-r.1
for
123409804
hvu-r.1
for
123443979
sbi-r.1
for
8077195
sbi-r.1
for
8054955
bdi-r.1
for
100831039
cre-r.1
for
CHLRE_01g011200v5


Ortholog ID: 4472
Species bna bna bna bra bra ath ghi ghi cit gma gma gma vvi ppo ppo mtr sly sot sot nta nta osa zma zma zma tae tae tae hvu hvu sbi sbi bdi cre
Symbol LOC125601103 LOC106404518 LOC106350974 LOC103829794 LOC103871047 TAF7 LOC107938391 LOC121220148 LOC102614199 LOC100810740 LOC100806004 LOC100781772 LOC100258782 LOC7463581 LOC7457707 LOC11433231 LOC101261021 LOC107057648 LOC102594176 LOC107808629 LOC107774462 LOC4338489 LOC103640335 LOC100193879 LOC103645861 LOC123074579 LOC123162181 LOC123070228 LOC123409804 LOC123443979 LOC8077195 LOC8054955 LOC100831039 CHLRE_01g011200v5
Function* transcription initiation factor TFIID subunit 7-like transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7-like transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 TBP-associated factor 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7-like transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7-like transcription initiation factor TFIID subunit 7-like transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 Transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7-like transcription initiation factor TFIID subunit 7-like transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 4
bna03022 Basal transcription factors 3
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 3
bna00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 4
bna03022 Basal transcription factors 3
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03020 RNA polymerase 2
bra03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 4
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 3
cit04141 Protein processing in endoplasmic reticulum 3
cit03040 Spliceosome 2
cit03083 Polycomb repressive complex 2
cit03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 3
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03020 RNA polymerase 2
ppo03420 Nucleotide excision repair 2
ppo03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03020 RNA polymerase 3
sly03420 Nucleotide excision repair 3
sly03040 Spliceosome 2
sly03022 Basal transcription factors 2
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03022 Basal transcription factors 4
sot03040 Spliceosome 4
sot03018 RNA degradation 3
sot03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03022 Basal transcription factors 3
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 4
zma04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 6
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00511 Other glycan degradation 3
tae04142 Lysosome 3
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00600 Sphingolipid metabolism 2
hvu04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 4
hvu04144 Endocytosis 2
hvu04145 Phagosome 2
hvu04148 Efferocytosis 2
hvu00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03022 Basal transcription factors 2
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03022 Basal transcription factors 2
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04145 Phagosome 4
bdi00190 Oxidative phosphorylation 3
bdi04136 Autophagy - other 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 125601103 106404518 106350974 103829794 103871047 841975 107938391 121220148 102614199 100810740 100806004 100781772 100258782 7463581 7457707 11433231 101261021 107057648 102594176 107808629 107774462 4338489 103640335 100193879 103645861 123074579 123162181 123070228 123409804 123443979 8077195 8054955 100831039 5715027
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