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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8076035   pentatricopeptide repeat-containing protein At1g11290, chloroplastic 
 osa-u.5   107280019   pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like 
 tae-r.2   123128005   pentatricopeptide repeat-containing protein At1g05750, chloroplastic 
 bdi-r.1   100825222   pentatricopeptide repeat-containing protein At1g11290, chloroplastic 
 vvi-u.5   104881105   pentatricopeptide repeat-containing protein At4g39530 
 ghi-r.1   107947784   pentatricopeptide repeat-containing protein DOT4, chloroplastic 
 ghi-r.1   121220341   pentatricopeptide repeat-containing protein At4g21300 

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Top 50 coexpressed genes to 8076035 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8076035 (sbi-r.1 coexpression data)

CoexMap"127752396"


zmaLOC127752396 | Entrez gene ID : 127752396    
Species sbi osa tae bdi vvi ghi hvu sot sly nta bna ppo zma cre mtr ath gma bra cit
Paralog 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (350 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (6389 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1549 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4389 genes)  IEA  
Protein NP_001401356.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 3,  cyto_nucl 3,  cyto_pero 3,  cyto_E.R. 3,  cyto_plas 3  (predict for NP_001401356.1)
Subcellular
localization
TargetP
mito 4  (predict for NP_001401356.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8076035
osa-u.5
for
107280019
tae-r.2
for
123128005
bdi-r.1
for
100825222
vvi-u.5
for
104881105
ghi-r.1
for
107947784
ghi-r.1
for
121220341


Ortholog ID: 16976
Species sbi osa tae bdi vvi ghi ghi
Symbol LOC8076035 LOC107280019 LOC123128005 LOC100825222 LOC104881105 LOC107947784 LOC121220341
Function* pentatricopeptide repeat-containing protein At1g11290, chloroplastic pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g11290, chloroplastic pentatricopeptide repeat-containing protein At4g39530 pentatricopeptide repeat-containing protein DOT4, chloroplastic pentatricopeptide repeat-containing protein At4g21300
Coexmap

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Coexpression

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KEGG Info
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8076035 107280019 123128005 100825222 104881105 107947784 121220341
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