Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   127899970   F-box/kelch-repeat protein At5g42360-like 
 cit-r.1   102624208   F-box/kelch-repeat protein At5g42350-like 
 ath-u.5   AT5G42350   Galactose oxidase/kelch repeat superfamily protein 
 ath-u.5   AT5G42360   Galactose oxidase/kelch repeat superfamily protein 
 bra-r.6   103838739   F-box/kelch-repeat protein At5g42350 
 ghi-r.1   107945241   F-box/kelch-repeat protein At5g42350 
 ghi-r.1   107922217   F-box/kelch-repeat protein At5g42350 
 bna-r.1   106452652   F-box/kelch-repeat protein At5g42350 
 bna-r.1   106431602   F-box/kelch-repeat protein At5g42350-like 
 gma-u.5   100813797   F-box/kelch-repeat protein At5g42350 
 gma-u.5   100781930   F-box/kelch-repeat protein At5g42350 
 vvi-u.5   100247861   F-box/kelch-repeat protein At5g42350 
 ppo-u.5   7485649   F-box/kelch-repeat protein At5g42360 
 ppo-u.5   7496851   F-box/kelch-repeat protein At5g42360 
 mtr-u.5   11419282   F-box/kelch-repeat protein At5g42350 
 sly-u.5   101262810   F-box/kelch-repeat protein At5g42350 
 sot-r.1   102602229   F-box/kelch-repeat protein At5g42350-like 
 nta-r.1   107820734   F-box/kelch-repeat protein At5g42350-like 
 nta-r.1   107818340   F-box/kelch-repeat protein At5g42350-like 
 nta-r.1   107796573   F-box/kelch-repeat protein At5g42350 
 zma-u.5   100272966   F-box/kelch-repeat protein At5g42350 
 tae-r.2   123122566   F-box/kelch-repeat protein At5g42350 
 tae-r.2   123113048   F-box/kelch-repeat protein At5g42350 
 hvu-r.1   123451920   F-box/kelch-repeat protein At5g42350-like 
 sbi-r.1   8077237   F-box/kelch-repeat protein At5g42350 
 bdi-r.1   100832276   F-box/kelch-repeat protein At5g42350 

close


Top 50 coexpressed genes to 127899970 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 127899970 (cit-r.1 coexpression data)

CoexMap"127899970"


citLOC127899970 | Entrez gene ID : 127899970    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta zma tae hvu sbi bdi cre osa
Paralog 2 2 1 2 2 2 1 2 1 1 1 3 1 2 1 1 1 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0019005 [list] [network] SCF ubiquitin ligase complex  (45 genes)  IEA  
GO MF
GO:0004523 [list] [network] RNA-DNA hybrid ribonuclease activity  (137 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (3051 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_052290114.1 [sequence] [blastp]
Subcellular
localization
wolf
extr 4,  cyto 3,  chlo 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_052290114.1)
Subcellular
localization
TargetP
other 6  (predict for XP_052290114.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
127899970
cit-r.1
for
102624208
ath-u.5
for
AT5G42350
ath-u.5
for
AT5G42360
bra-r.6
for
103838739
ghi-r.1
for
107945241
ghi-r.1
for
107922217
bna-r.1
for
106452652
bna-r.1
for
106431602
gma-u.5
for
100813797
gma-u.5
for
100781930
vvi-u.5
for
100247861
ppo-u.5
for
7485649
ppo-u.5
for
7496851
mtr-u.5
for
11419282
sly-u.5
for
101262810
sot-r.1
for
102602229
nta-r.1
for
107820734
nta-r.1
for
107818340
nta-r.1
for
107796573
zma-u.5
for
100272966
tae-r.2
for
123122566
tae-r.2
for
123113048
hvu-r.1
for
123451920
sbi-r.1
for
8077237
bdi-r.1
for
100832276


Ortholog ID: 7745
Species cit cit ath ath bra ghi ghi bna bna gma gma vvi ppo ppo mtr sly sot nta nta nta zma tae hvu sbi bdi
Symbol LOC127899970 LOC102624208 AT5G42350 AT5G42360 LOC103838739 LOC107945241 LOC107922217 LOC106452652 LOC106431602 LOC100813797 LOC100781930 LOC100247861 LOC7485649 LOC7496851 LOC11419282 LOC101262810 LOC102602229 LOC107820734 LOC107818340 LOC107796573 LOC100272966 LOC123113048 LOC123451920 LOC8077237 LOC100832276
Function* F-box/kelch-repeat protein At5g42360-like F-box/kelch-repeat protein At5g42350-like Galactose oxidase/kelch repeat superfamily protein Galactose oxidase/kelch repeat superfamily protein F-box/kelch-repeat protein At5g42350 F-box/kelch-repeat protein At5g42350 F-box/kelch-repeat protein At5g42350 F-box/kelch-repeat protein At5g42350 F-box/kelch-repeat protein At5g42350-like F-box/kelch-repeat protein At5g42350 F-box/kelch-repeat protein At5g42350 F-box/kelch-repeat protein At5g42350 F-box/kelch-repeat protein At5g42360 F-box/kelch-repeat protein At5g42360 F-box/kelch-repeat protein At5g42350 F-box/kelch-repeat protein At5g42350 F-box/kelch-repeat protein At5g42350-like F-box/kelch-repeat protein At5g42350-like F-box/kelch-repeat protein At5g42350-like F-box/kelch-repeat protein At5g42350 F-box/kelch-repeat protein At5g42350 F-box/kelch-repeat protein At5g42350 F-box/kelch-repeat protein At5g42350-like F-box/kelch-repeat protein At5g42350 F-box/kelch-repeat protein At5g42350
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00520 Amino sugar and nucleotide sugar metabolism 2
cit03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04814 Motor proteins 2
gma00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
ppo04382 Cornified envelope formation 2
ppo04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00670 One carbon pool by folate 6
sly01230 Biosynthesis of amino acids 4
sly01200 Carbon metabolism 4
sly00270 Cysteine and methionine metabolism 3
sly01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04142 Lysosome 4
sot04144 Endocytosis 3
sot05100 Bacterial invasion of epithelial cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04517 IgSF CAM signaling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 127899970 102624208 834241 834242 103838739 107945241 107922217 106452652 106431602 100813797 100781930 100247861 7485649 7496851 11419282 101262810 102602229 107820734 107818340 107796573 100272966 123113048 123451920 8077237 100832276
The preparation time of this page was 0.2 [sec].