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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7485649   F-box/kelch-repeat protein At5g42360 
 ppo-r.4   7485649   F-box/kelch-repeat protein At5g42360 
 ppo-m.4   7485649   F-box/kelch-repeat protein At5g42360 
 ppo-u.5   7496851   F-box/kelch-repeat protein At5g42360 
 gma-u.5   100813797   F-box/kelch-repeat protein At5g42350 
 gma-u.5   100781930   F-box/kelch-repeat protein At5g42350 
 mtr-u.5   11419282   F-box/kelch-repeat protein At5g42350 
 ath-u.5   AT5G42350   Galactose oxidase/kelch repeat superfamily protein 
 ath-u.5   AT5G42360   Galactose oxidase/kelch repeat superfamily protein 
 vvi-u.5   100247861   F-box/kelch-repeat protein At5g42350 
 sly-u.5   101262810   F-box/kelch-repeat protein At5g42350 
 zma-u.5   100272966   F-box/kelch-repeat protein At5g42350 

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Top 50 coexpressed genes to 7485649 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7485649 (ppo-u.5 coexpression data)

CoexMap"7485649"


ppoLOC7485649 | Entrez gene ID : 7485649    
Species ppo gma mtr ath vvi sly zma sbi nta bra osa cre cit hvu bdi sot tae bna ghi
Paralog 4 2 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0019005 [list] [network] SCF ubiquitin ligase complex  (65 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002307801.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1,  cysk 1  (predict for XP_002307801.1)
Subcellular
localization
TargetP
mito 4  (predict for XP_002307801.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7485649

.
ppo-r.4
for
7485649

.
ppo-m.4
for
7485649

.
ppo-u.5
for
7496851

.
gma-u.5
for
100813797

.
gma-u.5
for
100781930

.
mtr-u.5
for
11419282

.
ath-u.5
for
AT5G42350

.
ath-u.5
for
AT5G42360

.
vvi-u.5
for
100247861

.
sly-u.5
for
101262810

.
zma-u.5
for
100272966

.


Ortholog ID: 7745
Species ath ath gma gma sly zma bra vvi ppo ppo mtr hvu ghi ghi bna bna sbi sot cit cit bdi nta nta
Symbol AT5G42350 AT5G42360 LOC100781930 LOC100813797 LOC101262810 LOC100272966 LOC103838739 LOC100247861 LOC7496851 LOC7485649 LOC11419282 LOC123451920 LOC107945241 LOC107922217 LOC106431602 LOC106452652 LOC8077237 LOC102602229 LOC127899970 LOC102624208 LOC100832276 LOC107796573 LOC107818340
Function* Galactose oxidase/kelch repeat superfamily protein Galactose oxidase/kelch repeat superfamily protein F-box/kelch-repeat protein At5g42350 F-box/kelch-repeat protein At5g42350 F-box/kelch-repeat protein At5g42350 F-box/kelch-repeat protein At5g42350 F-box/kelch-repeat protein At5g42350 F-box/kelch-repeat protein At5g42350 F-box/kelch-repeat protein At5g42360 F-box/kelch-repeat protein At5g42360 F-box/kelch-repeat protein At5g42350 F-box/kelch-repeat protein At5g42350-like F-box/kelch-repeat protein At5g42350 F-box/kelch-repeat protein At5g42350 F-box/kelch-repeat protein At5g42350-like F-box/kelch-repeat protein At5g42350 F-box/kelch-repeat protein At5g42350 F-box/kelch-repeat protein At5g42350-like F-box/kelch-repeat protein At5g42360-like F-box/kelch-repeat protein At5g42350-like F-box/kelch-repeat protein At5g42350 F-box/kelch-repeat protein At5g42350 F-box/kelch-repeat protein At5g42350-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04814 Motor proteins 2
gma00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00670 One carbon pool by folate 6
sly01230 Biosynthesis of amino acids 4
sly01200 Carbon metabolism 4
sly00270 Cysteine and methionine metabolism 3
sly01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
ppo04382 Cornified envelope formation 2
ppo04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04142 Lysosome 4
sot04144 Endocytosis 3
sot05100 Bacterial invasion of epithelial cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00520 Amino sugar and nucleotide sugar metabolism 2
cit03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04517 IgSF CAM signaling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834241 834242 100781930 100813797 101262810 100272966 103838739 100247861 7496851 7485649 11419282 123451920 107945241 107922217 106431602 106452652 8077237 102602229 127899970 102624208 100832276 107796573 107818340
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