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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   127901334   pentatricopeptide repeat-containing protein At5g16420, mitochondrial-like 
 ath-u.5   AT5G16420   Pentatricopeptide repeat (PPR-like) superfamily protein 
 gma-u.5   100803526   pentatricopeptide repeat-containing protein At5g16420, mitochondrial 
 gma-u.5   100793875   pentatricopeptide repeat-containing protein At5g16420, mitochondrial 
 vvi-u.5   100247762   pentatricopeptide repeat-containing protein At5g16420, mitochondrial 
 ppo-u.5   7489813   pentatricopeptide repeat-containing protein At5g16420, mitochondrial 
 mtr-u.5   11405794   pentatricopeptide repeat-containing protein At5g16420, mitochondrial 
 sly-u.5   101259673   pentatricopeptide repeat-containing protein 
 osa-u.5   4339961   pentatricopeptide repeat-containing protein At5g16420, mitochondrial 

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Top 50 coexpressed genes to 127901334 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 127901334 (cit-r.1 coexpression data)

CoexMap"127901334"


citLOC127901334 | Entrez gene ID : 127901334    
Species cit ath gma vvi ppo mtr sly osa bdi hvu bra bna sbi ghi sot nta cre tae zma
Paralog 1 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_052294399.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 3,  cyto 2,  chlo_mito 2  (predict for XP_052294399.1)
Subcellular
localization
TargetP
other 7  (predict for XP_052294399.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
127901334
ath-u.5
for
AT5G16420
gma-u.5
for
100803526
gma-u.5
for
100793875
vvi-u.5
for
100247762
ppo-u.5
for
7489813
mtr-u.5
for
11405794
sly-u.5
for
101259673
osa-u.5
for
4339961


Ortholog ID: 9664
Species cit cit ath bra ghi ghi bna bna gma gma vvi ppo mtr sly sot nta nta osa tae tae hvu sbi bdi
Symbol LOC102611347 LOC127901334 AT5G16420 LOC103856194 LOC107954441 LOC107952976 LOC106433317 LOC111197948 LOC100793875 LOC100803526 LOC100247762 LOC7489813 LOC11405794 LOC101259673 LOC102593620 LOC107825212 LOC107801281 LOC4339961 LOC123148816 LOC123166255 LOC123407550 LOC8069031 LOC100844333
Function* pentatricopeptide repeat-containing protein At5g16420, mitochondrial pentatricopeptide repeat-containing protein At5g16420, mitochondrial-like Pentatricopeptide repeat (PPR-like) superfamily protein pentatricopeptide repeat-containing protein At5g16420, mitochondrial pentatricopeptide repeat-containing protein At5g16420, mitochondrial-like pentatricopeptide repeat-containing protein At5g16420, mitochondrial pentatricopeptide repeat-containing protein At5g16420, mitochondrial pentatricopeptide repeat-containing protein At5g16420, mitochondrial pentatricopeptide repeat-containing protein At5g16420, mitochondrial pentatricopeptide repeat-containing protein At5g16420, mitochondrial pentatricopeptide repeat-containing protein At5g16420, mitochondrial pentatricopeptide repeat-containing protein At5g16420, mitochondrial pentatricopeptide repeat-containing protein At5g16420, mitochondrial pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At5g16420, mitochondrial uncharacterized LOC107825212 uncharacterized LOC107801281 pentatricopeptide repeat-containing protein At5g16420, mitochondrial pentatricopeptide repeat-containing protein At5g16420, mitochondrial pentatricopeptide repeat-containing protein At5g16420, mitochondrial pentatricopeptide repeat-containing protein At5g16420, mitochondrial-like pentatricopeptide repeat-containing protein At5g16420, mitochondrial pentatricopeptide repeat-containing protein At5g16420, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 7
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
nta04016 MAPK signaling pathway - plant 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102611347 127901334 831503 103856194 107954441 107952976 106433317 111197948 100793875 100803526 100247762 7489813 11405794 101259673 102593620 107825212 107801281 4339961 123148816 123166255 123407550 8069031 100844333
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