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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G16420   Pentatricopeptide repeat (PPR-like) superfamily protein 
 ath-r.7   AT5G16420   Pentatricopeptide repeat (PPR-like) superfamily protein 
 ath-m.9   AT5G16420   Pentatricopeptide repeat (PPR-like) superfamily protein 
 ath-e.2   AT5G16420   Pentatricopeptide repeat (PPR-like) superfamily protein 
 ath-m.4.bio   AT5G16420   Pentatricopeptide repeat (PPR-like) superfamily protein 
 ath-m.4.hor   AT5G16420   Pentatricopeptide repeat (PPR-like) superfamily protein 
 ath-m.4.lig   AT5G16420   Pentatricopeptide repeat (PPR-like) superfamily protein 
 ath-m.4.str   AT5G16420   Pentatricopeptide repeat (PPR-like) superfamily protein 
 ath-m.4.tis   AT5G16420   Pentatricopeptide repeat (PPR-like) superfamily protein 
 gma-u.5   100803526   pentatricopeptide repeat-containing protein At5g16420, mitochondrial 
 gma-u.5   100793875   pentatricopeptide repeat-containing protein At5g16420, mitochondrial 
 vvi-u.5   100247762   pentatricopeptide repeat-containing protein At5g16420, mitochondrial 
 ppo-u.5   7489813   pentatricopeptide repeat-containing protein At5g16420, mitochondrial 
 mtr-u.5   11405794   pentatricopeptide repeat-containing protein At5g16420, mitochondrial 
 sly-u.5   101259673   pentatricopeptide repeat-containing protein 
 osa-u.5   4339961   pentatricopeptide repeat-containing protein At5g16420, mitochondrial 

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Top 50 coexpressed genes to AT5G16420 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G16420 (ath-u.5 coexpression data)

CoexMap"831503"


athAT5G16420 | Entrez gene ID : 831503    
Species ath gma vvi ppo mtr sly osa hvu sot tae nta bra cit ghi zma bna bdi sbi cre
Paralog 9 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
Protein NP_001331039.1 [sequence] [blastp]
NP_001331040.1 [sequence] [blastp]
NP_001331041.1 [sequence] [blastp]
NP_197146.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 4,  mito 3,  cyto_mito 1  (predict for NP_001331039.1)
chlo 6,  chlo_mito 4,  mito 3,  cyto_mito 1  (predict for NP_001331040.1)
chlo 6,  chlo_mito 4,  mito 3,  cyto_mito 1  (predict for NP_001331041.1)
chlo 6,  chlo_mito 4,  mito 3,  cyto_mito 1  (predict for NP_197146.1)
Subcellular
localization
TargetP
mito 8  (predict for NP_001331039.1)
mito 8  (predict for NP_001331040.1)
mito 8  (predict for NP_001331041.1)
mito 8  (predict for NP_197146.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G16420

.
ath-r.7
for
AT5G16420

.
ath-m.9
for
AT5G16420

.
ath-e.2
for
AT5G16420

.
ath-m.4.bio
for
AT5G16420

.
ath-m.4.hor
for
AT5G16420

.
ath-m.4.lig
for
AT5G16420

.
ath-m.4.str
for
AT5G16420

.
ath-m.4.tis
for
AT5G16420

.
gma-u.5
for
100803526

.
gma-u.5
for
100793875

.
vvi-u.5
for
100247762

.
ppo-u.5
for
7489813

.
mtr-u.5
for
11405794

.
sly-u.5
for
101259673

.
osa-u.5
for
4339961

.


Ortholog ID: 9664
Species ath gma gma sly osa bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit cit bdi nta nta
Symbol AT5G16420 LOC100793875 LOC100803526 LOC101259673 LOC4339961 LOC103856194 LOC100247762 LOC7489813 LOC11405794 LOC123148816 LOC123166255 LOC123407550 LOC107954441 LOC107952976 LOC106433317 LOC111197948 LOC8069031 LOC102593620 LOC102611347 LOC127901334 LOC100844333 LOC107825212 LOC107801281
Function* Pentatricopeptide repeat (PPR-like) superfamily protein pentatricopeptide repeat-containing protein At5g16420, mitochondrial pentatricopeptide repeat-containing protein At5g16420, mitochondrial pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At5g16420, mitochondrial pentatricopeptide repeat-containing protein At5g16420, mitochondrial pentatricopeptide repeat-containing protein At5g16420, mitochondrial pentatricopeptide repeat-containing protein At5g16420, mitochondrial pentatricopeptide repeat-containing protein At5g16420, mitochondrial pentatricopeptide repeat-containing protein At5g16420, mitochondrial pentatricopeptide repeat-containing protein At5g16420, mitochondrial pentatricopeptide repeat-containing protein At5g16420, mitochondrial-like pentatricopeptide repeat-containing protein At5g16420, mitochondrial-like pentatricopeptide repeat-containing protein At5g16420, mitochondrial pentatricopeptide repeat-containing protein At5g16420, mitochondrial pentatricopeptide repeat-containing protein At5g16420, mitochondrial pentatricopeptide repeat-containing protein At5g16420, mitochondrial pentatricopeptide repeat-containing protein At5g16420, mitochondrial pentatricopeptide repeat-containing protein At5g16420, mitochondrial pentatricopeptide repeat-containing protein At5g16420, mitochondrial-like pentatricopeptide repeat-containing protein At5g16420, mitochondrial uncharacterized LOC107825212 uncharacterized LOC107801281
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 7
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
nta04016 MAPK signaling pathway - plant 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831503 100793875 100803526 101259673 4339961 103856194 100247762 7489813 11405794 123148816 123166255 123407550 107954441 107952976 106433317 111197948 8069031 102593620 102611347 127901334 100844333 107825212 107801281
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