ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
nta-r.1	142166786	uncharacterized LOC142166786
nta-r.1	107819107	uncharacterized LOC107819107
nta-r.1	107818148	uncharacterized LOC107818148
nta-r.1	107803927	uncharacterized LOC107803927
sly-u.5	101249523	uncharacterized LOC101249523
sly-u.5	101263701	uncharacterized LOC101263701
sot-r.1	102584556	uncharacterized LOC102584556
sot-r.1	102598684	neurofilament heavy polypeptide
ath-u.5	AT5G11600	uncharacterized protein
ath-u.5	AT1G19990	nucleolin
gma-u.5	100527341	uncharacterized LOC100527341
gma-u.5	100781174	uncharacterized protein DDB_G0280579
gma-u.5	100785675	transcription initiation factor TFIID subunit 11
bra-r.6	103850785	uncharacterized LOC103850785
bra-r.6	103872806	DNA ligase 1
vvi-u.5	100262893	uncharacterized LOC100262893
vvi-u.5	100242110	uncharacterized LOC100242110
ppo-u.5	7476703	uncharacterized LOC7476703
ppo-u.5	7462302	uncharacterized LOC7462302
ppo-u.5	7477674	uncharacterized LOC7477674
mtr-u.5	25490132	uncharacterized LOC25490132
mtr-u.5	11442507	FACT complex subunit SSRP1
ghi-r.1	107897101	uncharacterized LOC107897101
ghi-r.1	121220020	uncharacterized LOC121220020
ghi-r.1	107957601	nucleolar protein dao-5
bna-r.1	106347069	nucleolin
bna-r.1	106375820	DNA ligase 1
bna-r.1	106383591	uncharacterized LOC106383591
cit-r.1	102609102	hypothetical protein
cit-r.1	102629837	uncharacterized LOC102629837
osa-u.5	4339819	uncharacterized LOC4339819
osa-u.5	4332261	uncharacterized LOC4332261
zma-u.5	100276864	uncharacterized LOC100276864
zma-u.5	100276253	uncharacterized LOC100276253
tae-r.2	123098051	ABC transporter F family member 4
tae-r.2	123183432	uncharacterized LOC123183432
tae-r.2	123150113	uncharacterized LOC123150113
hvu-r.1	123449148	nucleolar protein dao-5-like
hvu-r.1	123452875	serine/threonine-protein phosphatase 2A regulatory subunit psrA-like
sbi-r.1	8054337	uncharacterized LOC8054337
sbi-r.1	8066571	uncharacterized LOC8066571
bdi-r.1	100838032	uncharacterized protein DDB_G0286299
bdi-r.1	100836865	uncharacterized LOC100836865
cre-r.1	CHLRE_08g375850v5	uncharacterized protein

Top 50 coexpressed genes to 142166786 (nta-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 142166786 (nta-r.1 coexpression data)

CoexMap"142166786"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_075082186.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, plas 1, vacu 1

(predict for XP_075082186.1)

Subcellular
localization
TargetP

other 8

(predict for XP_075082186.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for 142166786	nta-r.1 for 107819107	nta-r.1 for 107818148	nta-r.1 for 107803927	sly-u.5 for 101249523	sly-u.5 for 101263701	sot-r.1 for 102584556	sot-r.1 for 102598684	ath-u.5 for AT5G11600	ath-u.5 for AT1G19990	gma-u.5 for 100527341	gma-u.5 for 100781174	gma-u.5 for 100785675	bra-r.6 for 103850785	bra-r.6 for 103872806	vvi-u.5 for 100262893	vvi-u.5 for 100242110	ppo-u.5 for 7476703	ppo-u.5 for 7462302	ppo-u.5 for 7477674	mtr-u.5 for 25490132	mtr-u.5 for 11442507	ghi-r.1 for 107897101	ghi-r.1 for 121220020	ghi-r.1 for 107957601	bna-r.1 for 106347069	bna-r.1 for 106375820	bna-r.1 for 106383591	cit-r.1 for 102609102	cit-r.1 for 102629837	osa-u.5 for 4339819	osa-u.5 for 4332261	zma-u.5 for 100276864	zma-u.5 for 100276253	tae-r.2 for 123098051	tae-r.2 for 123183432	tae-r.2 for 123150113	hvu-r.1 for 123449148	hvu-r.1 for 123452875	sbi-r.1 for 8054337	sbi-r.1 for 8066571	bdi-r.1 for 100838032	bdi-r.1 for 100836865	cre-r.1 for CHLRE_08g375850v5

Ortholog

Ortholog ID: 2844

Species

nta

sly

sot

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC142166786

uncharacterized LOC107819107

uncharacterized LOC107803927

uncharacterized LOC101249523

uncharacterized LOC101263701

uncharacterized LOC102584556

neurofilament heavy polypeptide

uncharacterized protein

nucleolin

uncharacterized protein DDB_G0280579

transcription initiation factor TFIID subunit 11

uncharacterized LOC100786782

uncharacterized LOC103850785

DNA ligase 1

uncharacterized LOC100262893

uncharacterized LOC100242110

uncharacterized LOC7476703

uncharacterized LOC7462302

uncharacterized LOC7477674

uncharacterized LOC25490132

FACT complex subunit SSRP1

uncharacterized LOC107897101

nucleolar protein dao-5

uncharacterized LOC107943803

nucleolin

DNA ligase 1

uncharacterized LOC106383019

hypothetical protein

uncharacterized LOC102629837

uncharacterized LOC4339819

uncharacterized LOC4332261

uncharacterized LOC100276864

uncharacterized LOC100276253

uncharacterized LOC123183432

uncharacterized LOC123150113

ABC transporter F family member 4

nucleolar protein dao-5-like

serine/threonine-protein phosphatase 2A regulatory subunit psrA-like

uncharacterized LOC8054337

uncharacterized LOC8066571

uncharacterized protein DDB_G0286299

uncharacterized LOC100836865

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03015	mRNA surveillance pathway	2
nta04136	Autophagy - other	2
nta04382	Cornified envelope formation	2
nta04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00600	Sphingolipid metabolism	4
nta04382	Cornified envelope formation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03060	Protein export	2
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	7
sly03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	4
sot03008	Ribosome biogenesis in eukaryotes	3
sot03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03060	Protein export	2
gma03020	RNA polymerase	2
gma03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	2
gma03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	4
bra04141	Protein processing in endoplasmic reticulum	3
bra04144	Endocytosis	2
bra03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00600	Sphingolipid metabolism	2
ppo04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00909	Sesquiterpenoid and triterpenoid biosynthesis	2
mtr00410	beta-Alanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03008	Ribosome biogenesis in eukaryotes	4
mtr03040	Spliceosome	2
mtr03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	6
ghi04120	Ubiquitin mediated proteolysis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03018	RNA degradation	2
bna03040	Spliceosome	2
bna04517	IgSF CAM signaling	2
bna04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	4
zma04145	Phagosome	3
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	2
tae03015	mRNA surveillance pathway	2
tae03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03008	Ribosome biogenesis in eukaryotes	2
sbi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03008	Ribosome biogenesis in eukaryotes	3
bdi00340	Histidine metabolism	2
bdi01230	Biosynthesis of amino acids	2
bdi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04145	Phagosome	5
bdi04144	Endocytosis	4
bdi04148	Efferocytosis	4
bdi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03040	Spliceosome	6
cre03020	RNA polymerase	2
cre03420	Nucleotide excision repair	2

Expression

Expression pattern

Entrez Gene ID^*

142166786

107819107

107803927

101249523

101263701

102584556

102598684

831032

838588

100781174

100785675

100786782

103850785

103872806

100262893

100242110

7476703

7462302

7477674

25490132

11442507

107897101

107957601

107943803

106347069

106375820

106383019

102609102

102629837

4339819

4332261

100276864

100276253

123183432

123150113

123092759

123449148

123452875

8054337

8066571

100838032

100836865

5719946

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Species	nta	sly	sot	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	2	2	3	2	2	3	2	3	3	2	2	2	3	2	2	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 142166786 (nta-r.1 coexpression data)

Top 50 enrichment test to 142166786 (nta-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**