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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   142166929   DExH-box ATP-dependent RNA helicase DExH12-like 
 nta-r.1   142166916   DExH-box ATP-dependent RNA helicase DExH12-like 
 nta-r.1   107771980   DExH-box ATP-dependent RNA helicase DExH14 
 nta-r.1   107829279   DExH-box ATP-dependent RNA helicase DExH12-like 
 sly-u.5   101254105   DExH-box ATP-dependent RNA helicase DExH12-like 
 sly-u.5   101255504   DExH-box ATP-dependent RNA helicase DExH12 
 sly-u.5   101260947   DExH-box ATP-dependent RNA helicase DExH14 
 sot-r.1   102605438   activating signal cointegrator 1 complex subunit 3 
 sot-r.1   102592348   U5 small nuclear ribonucleoprotein 200 kDa helicase-like 
 ath-u.5   AT2G42270   U5 small nuclear ribonucleoprotein helicase 
 ath-u.5   AT5G61140   U5 small nuclear ribonucleoprotein helicase 
 ath-u.5   emb1507   U5 small nuclear ribonucleoprotein helicase 
 gma-u.5   100816176   DExH-box ATP-dependent RNA helicase DExH12 
 gma-u.5   100811503   DExH-box ATP-dependent RNA helicase DExH14 
 gma-u.5   100780515   DExH-box ATP-dependent RNA helicase DExH12 
 bra-r.6   103853191   DExH-box ATP-dependent RNA helicase DExH12 
 bra-r.6   103854936   DExH-box ATP-dependent RNA helicase DExH14 
 bra-r.6   103834351   DExH-box ATP-dependent RNA helicase DExH12-like 
 vvi-u.5   100244096   DExH-box ATP-dependent RNA helicase DExH12 
 vvi-u.5   100251846   DExH-box ATP-dependent RNA helicase DExH14 
 ppo-u.5   7454552   DExH-box ATP-dependent RNA helicase DExH12 
 ppo-u.5   18105734   DExH-box ATP-dependent RNA helicase DExH14 
 ppo-u.5   7463125   DExH-box ATP-dependent RNA helicase DExH12 
 mtr-u.5   25491349   DExH-box ATP-dependent RNA helicase DExH12 
 mtr-u.5   11425401   DExH-box ATP-dependent RNA helicase DExH14 
 mtr-u.5   11423909   DExH-box ATP-dependent RNA helicase DExH12 
 ghi-r.1   107951232   DExH-box ATP-dependent RNA helicase DExH14 
 ghi-r.1   107896364   DExH-box ATP-dependent RNA helicase DExH12 
 ghi-r.1   107915277   DExH-box ATP-dependent RNA helicase DExH12 
 bna-r.1   106381512   DExH-box ATP-dependent RNA helicase DExH12-like 
 bna-r.1   125597825   DExH-box ATP-dependent RNA helicase DExH12-like 
 bna-r.1   125581437   DExH-box ATP-dependent RNA helicase DExH14 
 cit-r.1   102616786   DExH-box ATP-dependent RNA helicase DExH14 
 cit-r.1   102617292   DExH-box ATP-dependent RNA helicase DExH12-like 
 osa-u.5   4328024   DExH-box ATP-dependent RNA helicase DExH12 
 osa-u.5   4332045   DExH-box ATP-dependent RNA helicase DExH14 
 zma-u.5   103633484   DExH-box ATP-dependent RNA helicase DExH12 
 zma-u.5   103639442   DExH-box ATP-dependent RNA helicase DExH14 
 tae-r.2   123143060   DExH-box ATP-dependent RNA helicase DExH12 
 tae-r.2   123085072   DExH-box ATP-dependent RNA helicase DExH14 
 tae-r.2   123092984   DExH-box ATP-dependent RNA helicase DExH14 
 hvu-r.1   123449327   DExH-box ATP-dependent RNA helicase DExH14 
 hvu-r.1   123401531   DExH-box ATP-dependent RNA helicase DExH12 
 hvu-r.1   123410607   DExH-box ATP-dependent RNA helicase DExH12-like 
 sbi-r.1   8056894   DExH-box ATP-dependent RNA helicase DExH14 
 sbi-r.1   8066485   DExH-box ATP-dependent RNA helicase DExH12 
 sbi-r.1   8080211   DExH-box ATP-dependent RNA helicase DExH12 
 bdi-r.1   100821076   DExH-box ATP-dependent RNA helicase DExH14 
 bdi-r.1   100827281   DExH-box ATP-dependent RNA helicase DExH12 
 cre-r.1   CHLRE_17g744147v5   uncharacterized protein 

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Top 50 coexpressed genes to 142166929 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 142166929 (nta-r.1 coexpression data)

CoexMap"142166929"


ntaLOC142166929 | Entrez gene ID : 142166929    
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 4 3 2 3 3 3 2 3 3 3 3 2 2 2 3 3 3 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG nta03040 [list] [network] Spliceosome (402 genes)
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (4980 genes)  IEA  
GO MF
GO:0016887 [list] [network] ATP hydrolysis activity  (824 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (3859 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (9393 genes)  IEA  
Protein XP_075082916.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  nucl 2  (predict for XP_075082916.1)
Subcellular
localization
TargetP
other 8  (predict for XP_075082916.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
142166929
nta-r.1
for
142166916
nta-r.1
for
107771980
nta-r.1
for
107829279
sly-u.5
for
101254105
sly-u.5
for
101255504
sly-u.5
for
101260947
sot-r.1
for
102605438
sot-r.1
for
102592348
ath-u.5
for
AT2G42270
ath-u.5
for
AT5G61140
ath-u.5
for
emb1507
gma-u.5
for
100816176
gma-u.5
for
100811503
gma-u.5
for
100780515
bra-r.6
for
103853191
bra-r.6
for
103854936
bra-r.6
for
103834351
vvi-u.5
for
100244096
vvi-u.5
for
100251846
ppo-u.5
for
7454552
ppo-u.5
for
18105734
ppo-u.5
for
7463125
mtr-u.5
for
25491349
mtr-u.5
for
11425401
mtr-u.5
for
11423909
ghi-r.1
for
107951232
ghi-r.1
for
107896364
ghi-r.1
for
107915277
bna-r.1
for
106381512
bna-r.1
for
125597825
bna-r.1
for
125581437
cit-r.1
for
102616786
cit-r.1
for
102617292
osa-u.5
for
4328024
osa-u.5
for
4332045
zma-u.5
for
103633484
zma-u.5
for
103639442
tae-r.2
for
123143060
tae-r.2
for
123085072
tae-r.2
for
123092984
hvu-r.1
for
123449327
hvu-r.1
for
123401531
hvu-r.1
for
123410607
sbi-r.1
for
8056894
sbi-r.1
for
8066485
sbi-r.1
for
8080211
bdi-r.1
for
100821076
bdi-r.1
for
100827281
cre-r.1
for
CHLRE_17g744147v5


Ortholog ID: 1918
Species nta nta nta sly sly sly sot sot ath ath ath gma gma gma bra bra bra vvi vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna cit cit osa osa zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi cre
Symbol LOC107771980 LOC107829279 LOC107814777 LOC101254105 LOC101255504 LOC101260947 LOC102605438 LOC102592348 AT2G42270 AT5G61140 emb1507 LOC100816176 LOC100811503 LOC100780515 LOC103853191 LOC103854936 LOC103829399 LOC100244096 LOC100251846 LOC7454552 LOC18105734 LOC7463125 LOC25491349 LOC11425401 LOC11423909 LOC107951232 LOC107896364 LOC107915277 LOC106399090 LOC106387226 LOC106399072 LOC102616786 LOC102617292 LOC4328024 LOC4332045 LOC103633484 LOC103639442 LOC123085072 LOC123131673 LOC123098258 LOC123449327 LOC123401531 LOC123410607 LOC8056894 LOC8080211 LOC8063540 LOC100821076 LOC100827281 CHLRE_17g744147v5
Function* DExH-box ATP-dependent RNA helicase DExH14 DExH-box ATP-dependent RNA helicase DExH12-like DExH-box ATP-dependent RNA helicase DExH12-like DExH-box ATP-dependent RNA helicase DExH12-like DExH-box ATP-dependent RNA helicase DExH12 DExH-box ATP-dependent RNA helicase DExH14 activating signal cointegrator 1 complex subunit 3 U5 small nuclear ribonucleoprotein 200 kDa helicase-like U5 small nuclear ribonucleoprotein helicase U5 small nuclear ribonucleoprotein helicase U5 small nuclear ribonucleoprotein helicase DExH-box ATP-dependent RNA helicase DExH12 DExH-box ATP-dependent RNA helicase DExH14 DExH-box ATP-dependent RNA helicase DExH12 DExH-box ATP-dependent RNA helicase DExH12 DExH-box ATP-dependent RNA helicase DExH14 DExH-box ATP-dependent RNA helicase DExH12 DExH-box ATP-dependent RNA helicase DExH12 DExH-box ATP-dependent RNA helicase DExH14 DExH-box ATP-dependent RNA helicase DExH12 DExH-box ATP-dependent RNA helicase DExH14 DExH-box ATP-dependent RNA helicase DExH12 DExH-box ATP-dependent RNA helicase DExH12 DExH-box ATP-dependent RNA helicase DExH14 DExH-box ATP-dependent RNA helicase DExH12 DExH-box ATP-dependent RNA helicase DExH14 DExH-box ATP-dependent RNA helicase DExH12 DExH-box ATP-dependent RNA helicase DExH12 DExH-box ATP-dependent RNA helicase DExH12 DExH-box ATP-dependent RNA helicase DExH13 DExH-box ATP-dependent RNA helicase DExH12-like DExH-box ATP-dependent RNA helicase DExH14 DExH-box ATP-dependent RNA helicase DExH12-like DExH-box ATP-dependent RNA helicase DExH12 DExH-box ATP-dependent RNA helicase DExH14 DExH-box ATP-dependent RNA helicase DExH12 DExH-box ATP-dependent RNA helicase DExH14 DExH-box ATP-dependent RNA helicase DExH14 DExH-box ATP-dependent RNA helicase DExH12 DExH-box ATP-dependent RNA helicase DExH14 DExH-box ATP-dependent RNA helicase DExH14 DExH-box ATP-dependent RNA helicase DExH12 DExH-box ATP-dependent RNA helicase DExH12-like DExH-box ATP-dependent RNA helicase DExH14 DExH-box ATP-dependent RNA helicase DExH12 DExH-box ATP-dependent RNA helicase DExH12 DExH-box ATP-dependent RNA helicase DExH14 DExH-box ATP-dependent RNA helicase DExH12 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 9
nta03030 DNA replication 2
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
sly03013 Nucleocytoplasmic transport 3
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03420 Nucleotide excision repair 2
gma04136 Autophagy - other 2
gma04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
bra00310 Lysine degradation 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
bra00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 5
bra03082 ATP-dependent chromatin remodeling 3
bra04120 Ubiquitin mediated proteolysis 2
bra03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo04120 Ubiquitin mediated proteolysis 3
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 2
ghi03015 mRNA surveillance pathway 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 8
ghi00230 Purine metabolism 3
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03018 RNA degradation 2
ghi00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 6
ghi00230 Purine metabolism 3
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
sbi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 8
sbi03020 RNA polymerase 2
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
bdi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 7
bdi03020 RNA polymerase 2
bdi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 12
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107771980 107829279 107814777 101254105 101255504 101260947 102605438 102592348 818828 836235 838690 100816176 100811503 100780515 103853191 103854936 103829399 100244096 100251846 7454552 18105734 7463125 25491349 11425401 11423909 107951232 107896364 107915277 106399090 106387226 106399072 102616786 102617292 4328024 4332045 103633484 103639442 123085072 123131673 123098258 123449327 123401531 123410607 8056894 8080211 8063540 100821076 100827281 5729136
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