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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   142176402   cyclic dof factor 1-like 
 nta-r.1   107761138   cyclic dof factor 1-like 
 nta-r.1   107767788   cyclic dof factor 1-like 
 nta-r.1   107770525   cyclic dof factor 1 
 sly-u.5   101243956   cyclic dof factor 1 
 sly-u.5   101248009   cyclic dof factor 1 
 sly-u.5   101252243   cyclic dof factor 1-like 
 sot-r.1   102600000   cyclic dof factor 3-like 
 sot-r.1   102583986   cyclic dof factor 3-like 
 sot-r.1   102603307   cyclic dof factor 1 
 ath-u.5   CDF3   cycling DOF factor 3 
 ath-u.5   CDF2   cycling DOF factor 2 
 ath-u.5   CDF1   cycling DOF factor 1 
 gma-u.5   778113   cyclic dof factor 3 
 gma-u.5   100775201   cyclic dof factor 1 
 gma-u.5   100803454   cyclic dof factor 3 
 bra-r.6   103863905   cyclic dof factor 2 
 bra-r.6   103874677   cyclic dof factor 1 
 bra-r.6   103873236   cyclic dof factor 3 
 vvi-u.5   100265355   cyclic dof factor 2 
 vvi-u.5   100257057   cyclic dof factor 3 
 vvi-u.5   100254372   cyclic dof factor 2 
 ppo-u.5   7463038   cyclic dof factor 3 
 ppo-u.5   7464583   cyclic dof factor 3 
 mtr-u.5   11414470   cyclic dof factor 2 
 mtr-u.5   11410541   cyclic dof factor 2 
 mtr-u.5   11409779   cyclic dof factor 1 
 ghi-r.1   107889867   cyclic dof factor 3 
 ghi-r.1   107890451   cyclic dof factor 1 
 ghi-r.1   107891113   cyclic dof factor 2 
 bna-r.1   111207855   cyclic dof factor 1-like 
 bna-r.1   106432304   cyclic dof factor 2 
 bna-r.1   106369019   cyclic dof factor 1 
 cit-r.1   102612184   cyclic dof factor 3-like 
 cit-r.1   102615735   cyclic dof factor 2 
 cit-r.1   102629672   cyclic dof factor 3 
 osa-u.5   4344326   cyclic dof factor 2 
 osa-u.5   4324267   cyclic dof factor 1 
 osa-u.5   4331765   cyclic dof factor 1 
 zma-u.5   100275712   cyclic dof factor 2 
 zma-u.5   100275567   uncharacterized LOC100275567 
 zma-u.5   103650023   cyclic dof factor 2 
 tae-r.2   123187442   cyclic dof factor 1 
 tae-r.2   123051520   cyclic dof factor 1 
 tae-r.2   123093309   cyclic dof factor 1 
 hvu-r.1   123424683   cyclic dof factor 1-like 
 hvu-r.1   123449559   cyclic dof factor 1-like 
 hvu-r.1   123443531   cyclic dof factor 3-like 
 sbi-r.1   8078579   cyclic dof factor 2 
 sbi-r.1   8085828   cyclic dof factor 2 
 sbi-r.1   8082122   cyclic dof factor 1 
 bdi-r.1   100841048   cyclic dof factor 1 
 bdi-r.1   100820888   cyclic dof factor 2 
 bdi-r.1   100837366   cyclic dof factor 2 

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Top 50 coexpressed genes to 142176402 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 142176402 (nta-r.1 coexpression data)

CoexMap"142176402"


ntaLOC142176402 | Entrez gene ID : 142176402    
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 4 3 3 3 3 3 3 2 3 3 3 3 3 3 3 3 3 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (2987 genes)  IEA  
GO CC
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (2091 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (3714 genes)  IEA  
Protein XP_075100093.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  mito 1  (predict for XP_075100093.1)
Subcellular
localization
TargetP
other 6  (predict for XP_075100093.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
142176402
nta-r.1
for
107761138
nta-r.1
for
107767788
nta-r.1
for
107770525
sly-u.5
for
101243956
sly-u.5
for
101248009
sly-u.5
for
101252243
sot-r.1
for
102600000
sot-r.1
for
102583986
sot-r.1
for
102603307
ath-u.5
for
CDF3
ath-u.5
for
CDF2
ath-u.5
for
CDF1
gma-u.5
for
778113
gma-u.5
for
100775201
gma-u.5
for
100803454
bra-r.6
for
103863905
bra-r.6
for
103874677
bra-r.6
for
103873236
vvi-u.5
for
100265355
vvi-u.5
for
100257057
vvi-u.5
for
100254372
ppo-u.5
for
7463038
ppo-u.5
for
7464583
mtr-u.5
for
11414470
mtr-u.5
for
11410541
mtr-u.5
for
11409779
ghi-r.1
for
107889867
ghi-r.1
for
107890451
ghi-r.1
for
107891113
bna-r.1
for
111207855
bna-r.1
for
106432304
bna-r.1
for
106369019
cit-r.1
for
102612184
cit-r.1
for
102615735
cit-r.1
for
102629672
osa-u.5
for
4344326
osa-u.5
for
4324267
osa-u.5
for
4331765
zma-u.5
for
100275712
zma-u.5
for
100275567
zma-u.5
for
103650023
tae-r.2
for
123187442
tae-r.2
for
123051520
tae-r.2
for
123093309
hvu-r.1
for
123424683
hvu-r.1
for
123449559
hvu-r.1
for
123443531
sbi-r.1
for
8078579
sbi-r.1
for
8085828
sbi-r.1
for
8082122
bdi-r.1
for
100841048
bdi-r.1
for
100820888
bdi-r.1
for
100837366


Ortholog ID: 658
Species nta nta nta sly sly sly sot sot sot ath ath ath gma gma gma bra bra bra vvi vvi vvi ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna cit cit cit osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi
Symbol LOC107802463 LOC107804993 LOC107823205 LOC101243956 LOC101248009 LOC101252243 LOC102600000 LOC102603307 LOC102582118 CDF3 CDF2 CDF1 LOC100788246 LOC100813315 LOC100788247 LOC103863905 LOC103874677 LOC103855006 LOC100265355 LOC100257057 LOC100241530 LOC7463038 LOC7495982 LOC11410541 LOC11409779 LOC11435622 LOC107890451 LOC107924499 LOC107946520 LOC106432304 LOC106435356 LOC106352672 LOC102612184 LOC102615735 LOC102629672 LOC4344326 LOC4324267 LOC4331765 LOC100275712 LOC100275567 LOC100276261 LOC123051520 LOC123061029 LOC123078183 LOC123424683 LOC123449559 LOC123443531 LOC8085828 LOC8082122 LOC8054666 LOC100841048 LOC100825862 LOC100824853
Function* cyclic dof factor 1 cyclic dof factor 1-like cyclic dof factor 1 cyclic dof factor 1 cyclic dof factor 1 cyclic dof factor 1-like cyclic dof factor 3-like cyclic dof factor 1 cyclic dof factor 2-like cycling DOF factor 3 cycling DOF factor 2 cycling DOF factor 1 cyclic dof factor 1 cyclic dof factor 2 cyclic dof factor 2 cyclic dof factor 2 cyclic dof factor 1 cyclic dof factor 1 cyclic dof factor 2 cyclic dof factor 3 cyclic dof factor 3 cyclic dof factor 3 cyclic dof factor 2 cyclic dof factor 2 cyclic dof factor 1 cyclic dof factor 1 cyclic dof factor 1 cyclic dof factor 3 cyclic dof factor 3 cyclic dof factor 2 cyclic dof factor 3 cyclic dof factor 2 cyclic dof factor 3-like cyclic dof factor 2 cyclic dof factor 3 cyclic dof factor 2 cyclic dof factor 1 cyclic dof factor 1 cyclic dof factor 2 uncharacterized LOC100275567 uncharacterized LOC100276261 cyclic dof factor 1 cyclic dof factor 2 cyclic dof factor 3 cyclic dof factor 1-like cyclic dof factor 1-like cyclic dof factor 3-like cyclic dof factor 2 cyclic dof factor 1 cyclic dof factor 2 cyclic dof factor 1 cyclic dof factor 1 cyclic dof factor 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 2
nta00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00270 Cysteine and methionine metabolism 3
mtr00330 Arginine and proline metabolism 3
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 3
bna04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00010 Glycolysis / Gluconeogenesis 2
zma00030 Pentose phosphate pathway 2
zma00051 Fructose and mannose metabolism 2
zma00052 Galactose metabolism 2
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00460 Cyanoamino acid metabolism 3
tae00500 Starch and sucrose metabolism 3
tae00999 Biosynthesis of various plant secondary metabolites 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00270 Cysteine and methionine metabolism 2
hvu00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00561 Glycerolipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00561 Glycerolipid metabolism 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107802463 107804993 107823205 101243956 101248009 101252243 102600000 102603307 102582118 823904 833962 836364 100788246 100813315 100788247 103863905 103874677 103855006 100265355 100257057 100241530 7463038 7495982 11410541 11409779 11435622 107890451 107924499 107946520 106432304 106435356 106352672 102612184 102615735 102629672 4344326 4324267 4331765 100275712 100275567 100276261 123051520 123061029 123078183 123424683 123449559 123443531 8085828 8082122 8054666 100841048 100825862 100824853
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