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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18094739   root phototropism protein 3 
 ppo-r.4   18094739   root phototropism protein 3 
 ppo-u.5   7478376   root phototropism protein 3 
 gma-u.5   100777820   root phototropism protein 3-like 
 gma-u.5   100777676   coleoptile phototropism protein 1 
 mtr-u.5   25491354   root phototropism protein 3 
 mtr-u.5   11433561   root phototropism protein 3 
 ath-u.5   AT3G15570   Phototropic-responsive NPH3 family protein 
 ath-u.5   AT1G52770   Phototropic-responsive NPH3 family protein 
 vvi-u.5   100246371   coleoptile phototropism protein 1 
 sly-u.5   101254886   root phototropism protein 3-like 
 osa-u.5   4326222   coleoptile phototropism protein 1-like 
 zma-u.5   103649677   coleoptile phototropism protein 1 

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Top 50 coexpressed genes to 18094739 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18094739 (ppo-u.5 coexpression data)

CoexMap"18094739"


ppoLOC18094739 | Entrez gene ID : 18094739    
Species ppo gma mtr ath vvi sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 3 2 2 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_006369158.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 3,  chlo 2,  cysk 1,  golg 1  (predict for XP_006369158.2)
Subcellular
localization
TargetP
other 7,  scret 4  (predict for XP_006369158.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18094739

.
ppo-r.4
for
18094739

.
ppo-u.5
for
7478376

.
gma-u.5
for
100777820

.
gma-u.5
for
100777676

.
mtr-u.5
for
25491354

.
mtr-u.5
for
11433561

.
ath-u.5
for
AT3G15570

.
ath-u.5
for
AT1G52770

.
vvi-u.5
for
100246371

.
sly-u.5
for
101254886

.
osa-u.5
for
4326222

.
zma-u.5
for
103649677

.


Ortholog ID: 4234
Species ath ath gma gma sly osa zma bra bra vvi ppo ppo mtr mtr hvu ghi ghi bna bna sbi sot cit bdi bdi nta nta
Symbol AT3G15570 AT1G52770 LOC100777820 LOC100777676 LOC101254886 LOC4326222 LOC103649677 LOC103859628 LOC103869901 LOC100246371 LOC7478376 LOC18094739 LOC11433561 LOC25491354 LOC123426832 LOC107897223 LOC107913920 LOC106401107 LOC125610075 LOC8078793 LOC102584568 LOC102622897 LOC100821090 LOC100828281 LOC107783434 LOC107792920
Function* Phototropic-responsive NPH3 family protein Phototropic-responsive NPH3 family protein root phototropism protein 3-like coleoptile phototropism protein 1 root phototropism protein 3-like coleoptile phototropism protein 1-like coleoptile phototropism protein 1 coleoptile phototropism protein 1 coleoptile phototropism protein 1 coleoptile phototropism protein 1 root phototropism protein 3 root phototropism protein 3 root phototropism protein 3 root phototropism protein 3 coleoptile phototropism protein 1-like root phototropism protein 3 root phototropism protein 3 coleoptile phototropism protein 1 root phototropism protein 3-like coleoptile phototropism protein 1 root phototropism protein 3-like coleoptile phototropism protein 1 root phototropism protein 3 coleoptile phototropism protein 1 root phototropism protein 3 root phototropism protein 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00062 Fatty acid elongation 2
bra01212 Fatty acid metabolism 2
bra04142 Lysosome 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
bra00062 Fatty acid elongation 2
bra01212 Fatty acid metabolism 2
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 7
vvi00710 Carbon fixation by Calvin cycle 5
vvi00630 Glyoxylate and dicarboxylate metabolism 3
vvi00010 Glycolysis / Gluconeogenesis 2
vvi00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr02010 ABC transporters 2
mtr04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 3
mtr00710 Carbon fixation by Calvin cycle 2
mtr00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
hvu00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 8
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
bna00270 Cysteine and methionine metabolism 3
bna00350 Tyrosine metabolism 3
bna00360 Phenylalanine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 2
sbi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
sbi00270 Cysteine and methionine metabolism 2
sbi00350 Tyrosine metabolism 2
sbi00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 5
nta04075 Plant hormone signal transduction 4
nta00561 Glycerolipid metabolism 2
nta00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 4
nta00561 Glycerolipid metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820797 841710 100777820 100777676 101254886 4326222 103649677 103859628 103869901 100246371 7478376 18094739 11433561 25491354 123426832 107897223 107913920 106401107 125610075 8078793 102584568 102622897 100821090 100828281 107783434 107792920
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