ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	18095005	uncharacterized LOC18095005
ppo-r.4	18095005	uncharacterized LOC18095005
gma-u.5	100813858	uncharacterized LOC100813858
gma-u.5	100792416	uncharacterized LOC100792416
gma-u.5	100800510	uncharacterized LOC100800510
mtr-u.5	11443847	uncharacterized LOC11443847
mtr-u.5	25502423	uncharacterized LOC25502423
mtr-u.5	25497723	uncharacterized LOC25497723
ath-u.5	AT2G44310	Calcium-binding EF-hand family protein
bra-r.6	103858127	uncharacterized LOC103858127
vvi-u.5	100255025	uncharacterized LOC100255025
vvi-u.5	100260129	uncharacterized LOC100260129
ghi-r.1	107899204	uncharacterized LOC107899204
ghi-r.1	107954705	uncharacterized LOC107954705
bna-r.1	106388352	uncharacterized LOC106388352
bna-r.1	106438216	uncharacterized LOC106438216
cit-r.1	102621981	hypothetical protein
cit-r.1	102625783	uncharacterized LOC102625783
cit-r.1	102626363	uncharacterized LOC102626363
sly-u.5	101248133	uncharacterized LOC101248133
sot-r.1	102593067	uncharacterized LOC102593067
nta-r.1	107820817	uncharacterized LOC107820817
nta-r.1	107759007	uncharacterized LOC107759007
osa-u.5	4333095	uncharacterized LOC4333095
osa-u.5	4347408	uncharacterized LOC4347408
zma-u.5	103632927	uncharacterized LOC103632927
zma-u.5	100191804	uncharacterized LOC100191804
tae-r.2	123125842	uncharacterized LOC123125842
tae-r.2	123125002	uncharacterized LOC123125002
hvu-r.1	123399034	uncharacterized LOC123399034
sbi-r.1	8055199	uncharacterized LOC8055199
sbi-r.1	8055200	uncharacterized LOC8055200
bdi-r.1	100829094	uncharacterized LOC100829094
cre-r.1	CHLRE_08g385100v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0005509 [list] [network] calcium ion binding

(301 genes)

IEA

Protein

XP_006369478.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 2, nucl 2, cyto 2, cyto_nucl 2, plas 1, cysk_nucl 1

(predict for XP_006369478.1)

Subcellular
localization
TargetP

other 7

(predict for XP_006369478.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 18095005	ppo-r.4 for 18095005	gma-u.5 for 100813858	gma-u.5 for 100792416	gma-u.5 for 100800510	mtr-u.5 for 11443847	mtr-u.5 for 25502423	mtr-u.5 for 25497723	ath-u.5 for AT2G44310	bra-r.6 for 103858127	vvi-u.5 for 100255025	vvi-u.5 for 100260129	ghi-r.1 for 107899204	ghi-r.1 for 107954705	bna-r.1 for 106388352	bna-r.1 for 106438216	cit-r.1 for 102621981	cit-r.1 for 102625783	cit-r.1 for 102626363	sly-u.5 for 101248133	sot-r.1 for 102593067	nta-r.1 for 107820817	nta-r.1 for 107759007	osa-u.5 for 4333095	osa-u.5 for 4347408	zma-u.5 for 103632927	zma-u.5 for 100191804	tae-r.2 for 123125842	tae-r.2 for 123125002	hvu-r.1 for 123399034	sbi-r.1 for 8055199	sbi-r.1 for 8055200	bdi-r.1 for 100829094	cre-r.1 for CHLRE_08g385100v5

Ortholog

Ortholog ID: 1013

Species

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC100813858

uncharacterized LOC100791068

uncharacterized LOC100782908

uncharacterized LOC11443847

uncharacterized LOC25502423

uncharacterized LOC25497723

Calcium-binding EF-hand family protein

uncharacterized LOC103858127

uncharacterized LOC100260129

uncharacterized LOC107954705

uncharacterized LOC107956748

uncharacterized LOC106388352

uncharacterized LOC106438216

hypothetical protein

uncharacterized LOC102626363

uncharacterized LOC102626661

uncharacterized LOC101248133

uncharacterized LOC102593067

uncharacterized LOC107820817

uncharacterized LOC107759007

uncharacterized LOC4347408

uncharacterized LOC103632927

uncharacterized LOC123125002

uncharacterized LOC123108110

uncharacterized LOC123117314

uncharacterized LOC123399034

uncharacterized LOC8055859

uncharacterized LOC8064044

uncharacterized LOC100829094

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00010	Glycolysis / Gluconeogenesis	7
gma01200	Carbon metabolism	6
gma01230	Biosynthesis of amino acids	6
gma00620	Pyruvate metabolism	2
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00010	Glycolysis / Gluconeogenesis	7
gma01200	Carbon metabolism	6
gma01230	Biosynthesis of amino acids	6
gma04016	MAPK signaling pathway - plant	2
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00196	Photosynthesis - antenna proteins	3
mtr00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04070	Phosphatidylinositol signaling system	3
ath04016	MAPK signaling pathway - plant	2
ath04075	Plant hormone signal transduction	2
ath04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00600	Sphingolipid metabolism	2
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00061	Fatty acid biosynthesis	4
ghi01040	Biosynthesis of unsaturated fatty acids	4
ghi01212	Fatty acid metabolism	4
ghi00600	Sphingolipid metabolism	2
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04120	Ubiquitin mediated proteolysis	2
bna04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04120	Ubiquitin mediated proteolysis	2
bna04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01240	Biosynthesis of cofactors	2
cit00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	6
sly04145	Phagosome	5
sly04142	Lysosome	3
sly03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	3
sot04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00010	Glycolysis / Gluconeogenesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00740	Riboflavin metabolism	2
zma00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00564	Glycerophospholipid metabolism	3
sbi00740	Riboflavin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04712	Circadian rhythm - plant	2

Expression

Expression pattern

Entrez Gene ID^*

100813858

100791068

100782908

11443847

25502423

25497723

819039

103858127

100260129

107954705

107956748

106388352

106438216

102621981

102626363

102626661

101248133

102593067

107820817

107759007

4347408

103632927

123125002

123108110

123117314

123399034

8055859

8064044

100829094

5719796

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 18095005 (ppo-u.5 coexpression data)

Top 50 enrichment test to 18095005 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	3	3	1	1	2	2	2	3	1	1	2	2	2	2	1	2	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 18095005 (ppo-u.5 coexpression data)

Top 50 enrichment test to 18095005 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**