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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18095939   protein LHCP TRANSLOCATION DEFECT 
 ppo-r.4   18095939   protein LHCP TRANSLOCATION DEFECT 
 gma-u.5   100500557   ankyrin repeats-containing protein 
 gma-u.5   100499940   uncharacterized LOC100499940 
 mtr-u.5   11417698   protein LHCP TRANSLOCATION DEFECT 
 ath-u.5   GDC1   Ankyrin repeat family protein 
 vvi-u.5   100260680   protein LHCP TRANSLOCATION DEFECT 
 sly-u.5   104649487   ankyrin repeat family protein 
 osa-u.5   4343402   protein LHCP TRANSLOCATION DEFECT 
 zma-u.5   100277526   Protein LHCP TRANSLOCATION DEFECT 

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Top 50 coexpressed genes to 18095939 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18095939 (ppo-u.5 coexpression data)

CoexMap"18095939"


ppoLOC18095939 | Entrez gene ID : 18095939    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0090391 [list] [network] granum assembly  (1 genes)  IEA  
GO:0006886 [list] [network] intracellular protein transport  (350 genes)  IEA  
GO CC
GO:0009941 [list] [network] chloroplast envelope  (125 genes)  IEA  
GO:0009570 [list] [network] chloroplast stroma  (136 genes)  IEA  
GO MF
Protein XP_006370666.3 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_006370666.3)
Subcellular
localization
TargetP
chlo 9  (predict for XP_006370666.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18095939

.
ppo-r.4
for
18095939

.
gma-u.5
for
100500557

.
gma-u.5
for
100499940

.
mtr-u.5
for
11417698

.
ath-u.5
for
GDC1

.
vvi-u.5
for
100260680

.
sly-u.5
for
104649487

.
osa-u.5
for
4343402

.
zma-u.5
for
100277526

.


Ortholog ID: 6727
Species ath gma gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol GDC1 LOC100500557 LOC100499940 LOC104649487 LOC4343402 LOC100277526 LOC103871313 LOC103869310 LOC100260680 LOC18095939 LOC11417698 LOC123044664 LOC123188417 LOC123425864 LOC107938646 LOC107930297 LOC106377589 LOC106406287 CHLRE_12g551950v5 LOC8080135 LOC102589462 LOC102616185 LOC100831388 LOC107760099 LOC107781119
Function* Ankyrin repeat family protein ankyrin repeats-containing protein uncharacterized LOC100499940 ankyrin repeat family protein protein LHCP TRANSLOCATION DEFECT Protein LHCP TRANSLOCATION DEFECT protein LHCP TRANSLOCATION DEFECT-like protein LHCP TRANSLOCATION DEFECT protein LHCP TRANSLOCATION DEFECT protein LHCP TRANSLOCATION DEFECT protein LHCP TRANSLOCATION DEFECT protein LHCP TRANSLOCATION DEFECT protein LHCP TRANSLOCATION DEFECT protein LHCP TRANSLOCATION DEFECT protein LHCP TRANSLOCATION DEFECT protein LHCP TRANSLOCATION DEFECT protein LHCP TRANSLOCATION DEFECT protein LHCP TRANSLOCATION DEFECT uncharacterized protein protein LHCP TRANSLOCATION DEFECT protein LHCP TRANSLOCATION DEFECT protein LHCP TRANSLOCATION DEFECT protein LHCP TRANSLOCATION DEFECT protein LHCP TRANSLOCATION DEFECT protein LHCP TRANSLOCATION DEFECT-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 8
gma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
bra00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 7
vvi00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00260 Glycine, serine and threonine metabolism 3
tae00270 Cysteine and methionine metabolism 3
tae01200 Carbon metabolism 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 8
cre01240 Biosynthesis of cofactors 4
cre00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 10
sbi00860 Porphyrin metabolism 6
sbi01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 11
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841512 100500557 100499940 104649487 4343402 100277526 103871313 103869310 100260680 18095939 11417698 123044664 123188417 123425864 107938646 107930297 106377589 106406287 5719676 8080135 102589462 102616185 100831388 107760099 107781119
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