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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18098184   phototropin-2 
 ppo-r.4   18098184   phototropin-2 
 ppo-u.5   18102228   phototropin-2 
 ppo-u.5   7467655   phototropin-1 
 gma-u.5   100817565   phototropin-1 
 gma-u.5   100820096   phototropin-2 
 gma-u.5   100804783   phototropin-2 
 mtr-u.5   11445312   phototropin-2 
 mtr-u.5   11427766   phototropin-1 
 mtr-u.5   11408033   phototropin-1 
 ath-u.5   PHOT1   phototropin 1 
 ath-u.5   PHOT2   phototropin 2 
 vvi-u.5   100262213   phototropin-1 
 vvi-u.5   100241765   phototropin-2 
 sly-u.5   PHOT1   phototropin-1 
 sly-u.5   PHOT2   phototropin-2 
 osa-u.5   4351240   phototropin-1A-like 
 osa-u.5   4349531   phototropin-1B-like 
 osa-u.5   4335426   phototropin-2-like 
 zma-u.5   100281086   phototropin-1 
 zma-u.5   541663   blue-light receptor phototropin 1 

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Top 50 coexpressed genes to 18098184 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18098184 (ppo-u.5 coexpression data)

CoexMap"18098184"


ppoLOC18098184 | Entrez gene ID : 18098184    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 3 3 2 2 2 3 2 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006468 [list] [network] protein phosphorylation  (1496 genes)  IEA  
GO CC
GO:0005886 [list] [network] plasma membrane  (1125 genes)  IEA  
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (6111 genes)  IEA  
GO MF
GO:0004674 [list] [network] protein serine/threonine kinase activity  (455 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2559 genes)  IEA  
Protein XP_024454986.2 [sequence] [blastp]
XP_024454989.2 [sequence] [blastp]
XP_052308007.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 2  (predict for XP_024454986.2)
nucl 7,  cyto 2  (predict for XP_024454989.2)
nucl 7,  cyto 2  (predict for XP_052308007.1)
Subcellular
localization
TargetP
other 8  (predict for XP_024454986.2)
other 8  (predict for XP_024454989.2)
other 8  (predict for XP_052308007.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18098184

.
ppo-r.4
for
18098184

.
ppo-u.5
for
18102228

.
ppo-u.5
for
7467655

.
gma-u.5
for
100817565

.
gma-u.5
for
100820096

.
gma-u.5
for
100804783

.
mtr-u.5
for
11445312

.
mtr-u.5
for
11427766

.
mtr-u.5
for
11408033

.
ath-u.5
for
PHOT1

.
ath-u.5
for
PHOT2

.
vvi-u.5
for
100262213

.
vvi-u.5
for
100241765

.
sly-u.5
for
PHOT1

.
sly-u.5
for
PHOT2

.
osa-u.5
for
4351240

.
osa-u.5
for
4349531

.
osa-u.5
for
4335426

.
zma-u.5
for
100281086

.
zma-u.5
for
541663

.


Ortholog ID: 2479
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol PHOT2 PHOT1 LOC100776796 LOC100820096 PHOT1 PHOT2 LOC4351240 LOC4335426 LOC541663 LOC100281086 LOC103873605 LOC103856710 LOC100262213 LOC100241765 LOC18098184 LOC7467655 LOC11445312 LOC11408033 LOC123111444 LOC123103254 LOC123453041 LOC123426430 LOC107959067 LOC107924054 LOC106435600 LOC106347649 CHLRE_03g199000v5 LOC8072895 LOC8069866 LOC102603264 LOC102597308 LOC102626333 LOC102610634 LOC100844338 LOC100842084 LOC107764484 LOC107797310
Function* phototropin 2 phototropin 1 phototropin-1 phototropin-2 phototropin-1 phototropin-2 phototropin-1A-like phototropin-2-like blue-light receptor phototropin 1 phototropin-1 phototropin-1 phototropin-2 phototropin-1 phototropin-2 phototropin-2 phototropin-1 phototropin-2 phototropin-1 phototropin-1A phototropin-1A phototropin-1A phototropin-2-like phototropin-1 phototropin-2 phototropin-2-like phototropin-1-like uncharacterized protein phototropin-1A phototropin-2 phototropin-1 phototropin-2 phototropin-2 phototropin-1 phototropin-2 phototropin-1A phototropin-2-like phototropin-1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 10
sly00710 Carbon fixation by Calvin cycle 7
sly00010 Glycolysis / Gluconeogenesis 4
sly00030 Pentose phosphate pathway 4
sly00051 Fructose and mannose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00630 Glyoxylate and dicarboxylate metabolism 4
osa01200 Carbon metabolism 4
osa00260 Glycine, serine and threonine metabolism 2
osa00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00520 Amino sugar and nucleotide sugar metabolism 5
zma00511 Other glycan degradation 2
zma00600 Sphingolipid metabolism 2
zma00603 Glycosphingolipid biosynthesis - globo and isoglobo series 2
zma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00380 Tryptophan metabolism 3
bra00630 Glyoxylate and dicarboxylate metabolism 3
bra01200 Carbon metabolism 3
bra04016 MAPK signaling pathway - plant 3
bra04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00380 Tryptophan metabolism 2
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 2
vvi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00630 Glyoxylate and dicarboxylate metabolism 4
ppo01200 Carbon metabolism 4
ppo00250 Alanine, aspartate and glutamate metabolism 3
ppo00260 Glycine, serine and threonine metabolism 3
ppo01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00908 Zeatin biosynthesis 3
ghi00920 Sulfur metabolism 2
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04814 Motor proteins 2
cre03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 3
sot00195 Photosynthesis 3
sot00630 Glyoxylate and dicarboxylate metabolism 2
sot00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00902 Monoterpenoid biosynthesis 3
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit02010 ABC transporters 2
cit04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 2
bdi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 2
nta00620 Pyruvate metabolism 2
nta00710 Carbon fixation by Calvin cycle 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 3
nta04075 Plant hormone signal transduction 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835926 823721 100776796 100820096 100037733 100037494 4351240 4335426 541663 100281086 103873605 103856710 100262213 100241765 18098184 7467655 11445312 11408033 123111444 123103254 123453041 123426430 107959067 107924054 106435600 106347649 5718965 8072895 8069866 102603264 102597308 102626333 102610634 100844338 100842084 107764484 107797310
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